MirGeneDB 3.0
56 microRNA genes with node of origin Amniota
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Bta-Mir-338-P2-as None MIR-338 CAACAAA None None NC_037346.1 51569630 51569693 - Amniota Vertebrata No
Cfa-Mir-338-P2-as None MIR-338 CAACAAA None None chr9 918648 918710 - Amniota Vertebrata Yes 1
Cpi-Mir-338-P2-as None MIR-338 CAGCACC None None JH584464 13339451 13339515 - Amniota Vertebrata No
Eca-Mir-338-P2-as None MIR-338 CAACAAA None None CM009158.1 1969257 1969319 - Amniota Vertebrata No 1
Ete-Mir-338-P2-as None MIR-338 CAACAAA None None manual_Ete-Mir-338-P1 31 91 - Amniota Vertebrata Yes 1
Hsa-Mir-338-P2-as hsa-mir-3065 MIR-338 CAACAAA MIMAT0015066 MIMAT0015378 chr17 81125886 81125948 + Amniota Vertebrata Yes 1
Mml-Mir-338-P2-as None MIR-338 CAACAAA None None CM014351.1 77460701 77460763 + Amniota Vertebrata Yes 1
Mmu-Mir-338-P2-as mmu-mir-3065 MIR-338 CAACAAA MIMAT0014836 MIMAT0014837 chr11 120014780 120014841 + Amniota Vertebrata Yes
Pab-Mir-338-P2-as None MIR-338 CAACAAA None None CM054698.2 96593343 96593405 + Amniota Vertebrata Unknown 1
Rno-Mir-338-P2-as rno-mir-3065 MIR-338 CAACAAA MIMAT0017839 MIMAT0017840 chr10 109195254 109195316 + Amniota Vertebrata No 1
Tgu-Mir-338-P2-as None MIR-338 CAGCACC None None 18 1498111 1498175 - Amniota Vertebrata No
Aca-Mir-490 aca-mir-490 MIR-490 AACCUGG MIMAT0021976 MIMAT0021977 GL343419.1 442482 442543 - Amniota Amniota No 1
Ami-Mir-490 ami-mir-490 MIR-490 CAUGGAU MIMAT0038297 MIMAT0038298 NW_017710370.1 14945790 14945851 - Amniota Amniota No 1
Bta-Mir-490 bta-mir-490 MIR-490 AACCUGG None MIMAT0009331 NC_037331.1 100636709 100636768 + Amniota Amniota No 1
Cfa-Mir-490 cfa-mir-490 MIR-490 AACCUGG None MIMAT0009875 chr16 11628315 11628374 - Amniota Amniota No 1
Cja-Mir-490 None MIR-490 AACCUGG None None CM021922.1 107654047 107654107 - Amniota Amniota Unknown 1
Cli-Mir-490 None MIR-490 AACCUGG None None scaffold334 335624 335685 - Amniota Amniota No 1
Cpi-Mir-490 cpi-mir-490 MIR-490 AACCUGG MIMAT0037899 MIMAT0037900 JH584676 1266105 1266166 + Amniota Amniota No 1
Cpo-Mir-490 cpo-mir-490 MIR-490 AACCUGG MIMAT0047283 MIMAT0047284 scaffold_10 11766914 11766973 - Amniota Amniota No 1
Dno-Mir-490 dno-mir-490 MIR-490 AACCUGG MIMAT0047922 MIMAT0047923 JH568517 1207986 1208045 - Amniota Amniota No 1
Eca-Mir-490 eca-mir-490 MIR-490 AACCUGG MIMAT0012944 MIMAT0012945 CM009151.1 90886536 90886595 + Amniota Amniota No 1
Ete-Mir-490 None MIR-490 AACCUGG None None JH980321 29203809 29203868 + Amniota Amniota No 1
Gga-Mir-490 gga-mir-490 MIR-490 AACCUGG MIMAT0026633 MIMAT0003366 1 57867710 57867771 - Amniota Amniota No 1
Gja-Mir-490 None MIR-490 AACCUGG None None NW_015168089.1 491495 491556 + Amniota Amniota Yes 1
Hsa-Mir-490 hsa-mir-490 MIR-490 CAUGGAU MIMAT0004764 MIMAT0002806 chr7 136903205 136903264 + Amniota Amniota No 1
Laf-Mir-490 None MIR-490 AACCUGG None None GL010110.1 5718024 5718083 - Amniota Amniota Unknown 1
Mdo-Mir-490 None MIR-490 AACCUGG None None 8 198322862 198322921 + Amniota Amniota Unknown 1
Mml-Mir-490 mml-mir-490 MIR-490 AACCUGG MIMAT0006350 MIMAT0006351 CM014338.1 163327430 163327489 + Amniota Amniota No 1
Mmr-Mir-490 None MIR-490 AACCUGG None None CM007671.1 15599572 15599631 - Amniota Amniota No 1
Mmu-Mir-490 mmu-mir-490 MIR-490 AACCUGG MIMAT0017261 MIMAT0003780 chr6 36421763 36421822 + Amniota Amniota No 1
Neu-Mir-490 None MIR-490 AACCUGG None None CM051815.1 112420452 112420511 - Amniota Amniota Unknown 1
Oan-Mir-490 oan-mir-490 MIR-490 AACCUGG MIMAT0006810 MIMAT0006811 NC_041737.1 51002637 51002696 + Amniota Amniota No 1
Ocu-Mir-490 ocu-mir-490 MIR-490 AACCUGG MIMAT0048479 MIMAT0048480 chr7 1159609 1159668 + Amniota Amniota No 1
Pab-Mir-490 None MIR-490 AACCUGG None None CM054685.2 134297719 134297778 + Amniota Amniota No 1
Pbv-Mir-490 pbv-mir-490 MIR-490 AACCUGG MIMAT0039063 MIMAT0039064 KE954944.1 24251 24312 - Amniota Amniota No 1
Rno-Mir-490 rno-mir-490 MIR-490 AACCUGG MIMAT0017356 MIMAT0012823 chr4 63342964 63343023 + Amniota Amniota No 1
Sha-Mir-490 None MIR-490 AACCUGG None None GL861657.1 106432 106492 + Amniota Amniota Unknown 1
Spt-Mir-490 None MIR-490 AACCUGG None None QEPC01008412.1 243811 243872 + Amniota Amniota Unknown 1
Tgu-Mir-490 tgu-mir-490-1 MIR-490 AACCUGG MIMAT0026996 MIMAT0014548 1A 55597486 55597547 + Amniota Amniota No 1
Aca-Mir-1397 aca-mir-1397 MIR-1397 GCAUUGC MIMAT0021764 None 3 116429089 116429146 - Amniota Amniota Unknown 1
Ami-Mir-1397 ami-mir-1397 MIR-1397 GCAUUGC MIMAT0038314 MIMAT0038315 NW_017709083.1 1016086 1016143 + Amniota Amniota No 1
Cpi-Mir-1397 cpi-mir-1397 MIR-1397 GCAUUGC MIMAT0037915 None JH584466 11772073 11772130 + Amniota Amniota Unknown 1
Gga-Mir-1397 gga-mir-1397 MIR-1397 GCAUUGC MIMAT0007283 MIMAT0007284 1 128273803 128273860 + Amniota Amniota No 1
Gja-Mir-1397 None MIR-1397 GCAUUGC None None NW_015174328.1 240982 241039 - Amniota Amniota Unknown 1
Neu-Mir-1397 None MIR-1397 GCAUUGC None None CM051817.1 388872773 388872830 + Amniota Amniota Unknown 1
Oan-Mir-1397 oan-mir-1397 MIR-1397 GCAUUGC MIMAT0007199 MIMAT0007200 NC_041742.1 18645071 18645128 - Amniota Amniota No 1
Pbv-Mir-1397 pbv-mir-1397 MIR-1397 GCAUUGC MIMAT0039079 MIMAT0039080 KE957594.1 57716 57773 - Amniota Amniota Unknown 1
Sha-Mir-1397 None MIR-1397 GCAUUGC None None GL849817.1 302485 302542 + Amniota Amniota No 1
Spt-Mir-1397 None MIR-1397 GCAUUGC None None QEPC01012497.1 499713 499770 - Amniota Amniota Unknown
Tgu-Mir-1397 tgu-mir-1397 MIR-1397 GCAUUGC MIMAT0025397 MIMAT0027341 1 92314174 92314231 - Amniota Amniota No 1
Ami-Mir-1416 ami-mir-1416 MIR-1416 CCUUAAC MIMAT0038316 None NW_017713772.1 28059847 28059906 - Amniota Amniota Unknown 1 1
Cli-Mir-1416 cli-mir-1416 MIR-1416 CCUUAAC MIMAT0038676 MIMAT0038677 scaffold148 1182294 1182352 - Amniota Amniota No 1
Cpi-Mir-1416 cpi-mir-1416 MIR-1416 CCUUAAC MIMAT0037916 None JH584686 9325225 9325285 - Amniota Amniota Unknown 1 1
Gga-Mir-1416 gga-mir-1416 MIR-1416 CCUUAAC MIMAT0007285 MIMAT0007286 Z 34934107 34934166 + Amniota Amniota No 1
Oan-Mir-1416 oan-mir-1416 MIR-1416 CCUUAAC MIMAT0007271 None NC_041753.1 57421839 57421895 + Amniota Amniota Unknown 1 1
Tgu-Mir-1416 None MIR-1416 CCUUAAC None None Z 12198647 12198705 + Amniota Amniota No 1

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