| MirGeneDB ID | Oan-Mir-1416 |
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| Family name |
MIR-1416 (all species) |
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| Seed |
CCUUAAC |
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| Species |
Platypus (Ornithorhynchus anatinus) |
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| MiRBase ID |
oan-mir-1416
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| Paralogues |
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| Orthologues |
Ami-Mir-1416
Cli-Mir-1416
Cpi-Mir-1416
Gga-Mir-1416
Tgu-Mir-1416
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| Node of Origin (locus) |
Amniota
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| Node of Origin (family) |
Amniota
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Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041753.1: 57421839-57421895 [+]
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Precursor
(pre-Mir +30nt flank) |
CUGGGCAAGUAACCAAUGGCUGUCACUCUUUCCUUAACUCAUGCCGCUGUGCAUUCUCUUCUUUCGCAACAGGGUGGGUUGAGUACAAAGUGCCGGUCUAAUCCAGCUAAUUCUUGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUGGGCAAGUAACCAAU--| U CUUUC AU G - AUUCUC
GGCUG CACU CUUAACUC GCC CUGU GC \
CUGGC GUGA GAGUUGGG UGG GACA CG U
AGUUCUUAAUCGACCUAAU^ C AACAU -- - A CUUUCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Oan-Mir-1416_5p |
| mirBase accession | MIMAT0007271 |
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| Sequence |
0- UCCUUAACUCAUGCCGCUGUGC -22
Get sequence
|
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| Star sequence |
Oan-Mir-1416_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
37- AACAGGGUGGGUUGAGUACA -57
Get sequence
|
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