MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-490

Family name MIR-490 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-490  Ami-Mir-490  Bta-Mir-490  Cfa-Mir-490  Cja-Mir-490  Cli-Mir-490  Cpi-Mir-490  Cpo-Mir-490  Dno-Mir-490  Eca-Mir-490  Ete-Mir-490  Gga-Mir-490  Gja-Mir-490  Hsa-Mir-490  Laf-Mir-490  Mdo-Mir-490  Mml-Mir-490  Mmr-Mir-490  Mmu-Mir-490  Neu-Mir-490  Oan-Mir-490  Ocu-Mir-490  Pbv-Mir-490  Rno-Mir-490  Sha-Mir-490  Spt-Mir-490  Tgu-Mir-490 
Node of Origin (locus) Amniota
Node of Origin (family) Amniota
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054685.2: 134297719-134297778 [+] UCSC Ensembl
Seed AACCUGG
Precursor
(pre-Mir +30nt flank)		 
UUGCUGGUUUGGAAAGUUCAUUGUUCGACACCAUGGAUCUCCAGGUGGGUCAAGUUUAGAGAUGCACCAACCUGGAGGACUCCAUGCUGUUGAGCUGUUCACAAGCAGCGGACACUUCCA
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Structure
        10        20           30          40        50        
UUGCUGGUUUGGAAAGUUCAUU---        C      --|        G   CAAGUUU 
                         GUUCGACA CAUGGA  UCUCCAGGU GGU       \
                         CGAGUUGU GUACCU  GGAGGUCCA CCA       A
ACCUUCACAGGCGACGAACACUUGU        C      CA^        A   CGUAGAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Star sequence

Pab-Mir-490_5p*
mirBase accessionNone
Sequence 
0- CCAUGGAUCUCCAGGUGGGU -20
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Mature sequence

Pab-Mir-490_3p
mirBase accessionNone
Sequence 
37- CAACCUGGAGGACUCCAUGCUGU -60
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