Mir-338-P2

MirGeneDB ID	Spt-Mir-338-P2
Family name	MIR-338 (all species)
Species	Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues
Orthologues	Aca-Mir-338-P2 Ami-Mir-338-P2 Bta-Mir-338-P2 Bta-Mir-338-P2-as Cfa-Mir-338-P2 Cfa-Mir-338-P2-as Cja-Mir-338-P2 Cli-Mir-338-P2 Cmi-Mir-338-P2 Cpi-Mir-338-P2 Cpi-Mir-338-P2-as Cpo-Mir-338-P2 Dno-Mir-338-P2 Dre-Mir-338-P2a Dre-Mir-338-P2b Ebu-Mir-338-o2 Eca-Mir-338-P2 Eca-Mir-338-P2-as Ete-Mir-338-P2 Ete-Mir-338-P2-as Gga-Mir-338-P2 Gja-Mir-338-P2 Gmo-Mir-338-P2a Gmo-Mir-338-P2b Hsa-Mir-338-P2 Hsa-Mir-338-P2-as Laf-Mir-338-P2 Lch-Mir-338-P2 Loc-Mir-338-P2 Mal-Mir-338-P2a Mal-Mir-338-P2b Mdo-Mir-338-P2 Mml-Mir-338-P2 Mml-Mir-338-P2-as Mmr-Mir-338-P2 Mmu-Mir-338-P2 Mmu-Mir-338-P2-as Mun-Mir-338-P2e Mun-Mir-338-P2f Neu-Mir-338-P2 Oan-Mir-338-P2 Ocu-Mir-338-P2 Pab-Mir-338-P2 Pab-Mir-338-P2-as Pbv-Mir-338-P2 Rno-Mir-338-P2 Rno-Mir-338-P2-as Sha-Mir-338-P2 Sto-Mir-338-P2 Tgu-Mir-338-P2 Tgu-Mir-338-P2-as Tni-Mir-338-P2a Tni-Mir-338-P2b Xla-Mir-338-P2c Xla-Mir-338-P2d Xtr-Mir-338-P2
Node of Origin (locus)	Vertebrata
Node of Origin (family)	Vertebrata
Genome context (GCA_003113815.1_ASM311381v1_TUATARA)	QEPC01011341.1: 17583536-17583596 [-] UCSC Ensembl
Seed	CCAGCAU
Precursor (pre-Mir +30nt flank)	CCUUCCUCGCACCGCCUGCUUUUCCUCCCCAACAAUAUCCUGAUGCUGAGUGAGUGGUGCUCGCAGACUCCAGCAUCAGUGAUUUUGUUGAGGAGGGGGAGUGUUGUCAUCUCCUGCCUCC Get precursor sequence
Structure	10 20 30 40 50 CCUUCCUCGCACCGCCU-- UU C U - -\| GAGUGGU GCUU CCUCC CAACAA AUC CUGAUGCU GAGU \ UGAG GGAGG GUUGUU UAG GACUACGA CUCA G CCUCCGUCCUCUACUGUUG GG A U U C^ GACGCUC . 110 100 90 80 70 60
Deep sequencing
3' NTU	Unknown
Motifs	UG at 5p(-14), CNNC at 3p(+17)
Star sequence	Spt-Mir-338-P2_5p* (predicted)
mirBase accession	None
Sequence	0- AACAAUAUCCUGAUGCUGAGU -21 Get sequence
Mature sequence	Spt-Mir-338-P2_3p (predicted)
mirBase accession	None
Sequence	38- UCCAGCAUCAGUGAUUUUGUUGA -61 Get sequence

Spt-Mir-338-P2

Spt-Mir-338-P2_5p* (predicted)

Spt-Mir-338-P2_3p (predicted)