MirGeneDB 3.0
83 microRNA genes with seed GCUGGUG
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pma-Mir-138-o1 pma-mir-138a MIR-138 GCUGGUG MIMAT0019469 None NC_046122.1 1115167 1115233 - P. marinus Vertebrata Unknown 1 1
Pma-Mir-138-o2 None MIR-138 GCUGGUG None None NC_046088.1 7504922 7504989 + P. marinus Vertebrata Yes 1
Pma-Mir-138-o3 pma-mir-138b MIR-138 GCUGGUG MIMAT0019470 None NC_046113.1 8496747 8496809 + P. marinus Vertebrata Unknown 1 1
Aca-Mir-138-P1 aca-mir-138-2 MIR-138 GCUGGUG MIMAT0021757 MIMAT0021759 1 193168238 193168298 + Vertebrata Vertebrata No 1 1
Ami-Mir-138-P1 ami-mir-138-1 MIR-138 GCUGGUG MIMAT0038155 MIMAT0038156 NW_017712875.1 38580995 38581055 - Vertebrata Vertebrata No 1 1
Bta-Mir-138-P1 bta-mir-138-1 MIR-138 GCUGGUG MIMAT0003813 None NC_037349.1 16003778 16003838 + Vertebrata Vertebrata No 1
Cfa-Mir-138-P1 cfa-mir-138a MIR-138 GCUGGUG MIMAT0006654 None chr23 2223137 2223197 - Vertebrata Vertebrata No 1 1
Cja-Mir-138-P1 None MIR-138 GCUGGUG None None CM021929.1 20654376 20654436 + Vertebrata Vertebrata Unknown 1 1
Cli-Mir-138-P1 cli-mir-138-1 MIR-138 GCUGGUG MIMAT0038522 MIMAT0038523 scaffold380 712512 712572 + Vertebrata Vertebrata No 1
Cmi-Mir-138-P1 None MIR-138 GCUGGUG None None KI635937.1 73856 73915 + Vertebrata Vertebrata Unknown 1 1
Cpo-Mir-138-P1 cpo-mir-138-1 MIR-138 GCUGGUG MIMAT0046999 MIMAT0047000 scaffold_7 45796470 45796530 + Vertebrata Vertebrata No 1 1
Dno-Mir-138-P1 dno-mir-138-1 MIR-138 GCUGGUG MIMAT0047648 MIMAT0047649 JH578458 1342211 1342271 + Vertebrata Vertebrata No 1
Eca-Mir-138-P1 eca-mir-138-2 MIR-138 GCUGGUG MIMAT0012925 None CM009163.1 43830200 43830260 - Vertebrata Vertebrata No 1 1
Ete-Mir-138-P1 None MIR-138 GCUGGUG None None JH980325 6972694 6972754 - Vertebrata Vertebrata No 1 1
Gga-Mir-138-P1 gga-mir-138-1 MIR-138 GCUGGUG MIMAT0001122 MIMAT0026505 2 40676611 40676671 - Vertebrata Vertebrata No 1
Gja-Mir-138-P1 None MIR-138 GCUGGUG None None NW_015173213.1 78744 78804 - Vertebrata Vertebrata No 1 1
Hsa-Mir-138-P1 hsa-mir-138-1 MIR-138 GCUGGUG MIMAT0000430 MIMAT0004607 chr3 44114234 44114294 + Vertebrata Vertebrata No 1 1
Laf-Mir-138-P1 None MIR-138 GCUGGUG None None GL010039.1 23228294 23228354 - Vertebrata Vertebrata Unknown 1 1
Lch-Mir-138-P1 None MIR-138 GCUGGUG None None JH127183.1 243830 243890 + Vertebrata Vertebrata Unknown 1 1
Loc-Mir-138-P1 None MIR-138 GCUGGUG None None LG11 966407 966466 + Vertebrata Vertebrata No 1
Mdo-Mir-138-P1 None MIR-138 GCUGGUG None None 8 293031779 293031839 - Vertebrata Vertebrata No 1
Mml-Mir-138-P1 None MIR-138 GCUGGUG None None CM014337.1 100028501 100028561 + Vertebrata Vertebrata No 1 1
Mmr-Mir-138-P1 mmr-mir-138-1 MIR-138 GCUGGUG MIMAT0049141 None CM007674.1 820327 820387 - Vertebrata Vertebrata No 1 1
Mmu-Mir-138-P1 mmu-mir-138-1 MIR-138 GCUGGUG MIMAT0000150 MIMAT0004668 chr9 122682898 122682958 + Vertebrata Vertebrata No 1 1
Mun-Mir-138-P1 None MIR-138 GCUGGUG None None LR594632.1 263950979 263951039 - Vertebrata Vertebrata No 1 1
Neu-Mir-138-P1 None MIR-138 GCUGGUG None None CM051815.1 22357104 22357164 + Vertebrata Vertebrata Unknown 1 1
Oan-Mir-138-P1 oan-mir-138-1 MIR-138 GCUGGUG MIMAT0007216 MIMAT0007216 NC_041735.1 51462583 51462643 - Vertebrata Vertebrata No 1
Ocu-Mir-138-P1 ocu-mir-138-1 MIR-138 GCUGGUG MIMAT0048236 MIMAT0048237 chr9 448099 448159 - Vertebrata Vertebrata No 1
Pab-Mir-138-P1 None MIR-138 GCUGGUG None None CM068843.1 110381952 110382012 - Vertebrata Vertebrata No 1 1
Pbv-Mir-138-P1 pbv-mir-138-2 MIR-138 GCUGGUG MIMAT0038949 None KE953062.1 339909 339969 - Vertebrata Vertebrata Unknown 1 1
Rno-Mir-138-P1 rno-mir-138-1 MIR-138 GCUGGUG MIMAT0000844 MIMAT0004734 chr8 131731748 131731808 + Vertebrata Vertebrata No 1 1
Sha-Mir-138-P1 sha-mir-138-2 MIR-138 GCUGGUG None MIMAT0022771 GL861705.1 3033985 3034045 - Vertebrata Vertebrata No 1
Spt-Mir-138-P1 None MIR-138 GCUGGUG None None QEPC01004101.1 3091898 3091958 - Vertebrata Vertebrata Unknown 1 1
Sto-Mir-138-P1 None MIR-138 GCUGGUG None None BFAA01000096.1 1244101 1244161 + Vertebrata Vertebrata Unknown 1 1
Tgu-Mir-138-P1 tgu-mir-138-1 MIR-138 GCUGGUG MIMAT0014515 MIMAT0026979 2 42193929 42193989 - Vertebrata Vertebrata No 1
Xtr-Mir-138-P1 xtr-mir-138 MIR-138 GCUGGUG MIMAT0003599 None chr6 73571452 73571512 + Vertebrata Vertebrata No 1
Dre-Mir-138-P1a dre-mir-138-2 MIR-138 GCUGGUG MIMAT0001835 MIMAT0048652 chr16 7836268 7836329 - Clupeocephala Vertebrata Yes 1 1
Gmo-Mir-138-P1a gmo-mir-138-3 MIR-138 GCUGGUG MIMAT0044223 MIMAT0044224 GeneScaffold_3530 55998 56058 + Clupeocephala Vertebrata No 1 1
Mal-Mir-138-P1a None MIR-138 GCUGGUG None None KV885090.1 722595 722655 - Clupeocephala Vertebrata No 1
Tni-Mir-138-P1a None MIR-138 GCUGGUG None None 21 4348474 4348534 - Clupeocephala Vertebrata Unknown 1
Gmo-Mir-138-P1b gmo-mir-138-2 MIR-138 GCUGGUG MIMAT0044223 MIMAT0044320 GeneScaffold_896 27322 27382 + Clupeocephala Vertebrata No 1
Mal-Mir-138-P1b None MIR-138 GCUGGUG None None KV884804.1 850113 850173 - Clupeocephala Vertebrata No 1
Xla-Mir-138-P1c xla-mir-138-1 MIR-138 GCUGGUG MIMAT0046449 MIMAT0046451 NC_030734.1 48641499 48641559 - X. laevis Vertebrata No 1 1
Xla-Mir-138-P1d xla-mir-138-2 MIR-138 GCUGGUG MIMAT0046449 MIMAT0046450 NC_030735.1 42121469 42121529 - X. laevis Vertebrata No 1 1
Aca-Mir-138-P2 aca-mir-138-1 MIR-138 GCUGGUG MIMAT0021757 MIMAT0021758 GL343675.1 287395 287462 + Vertebrata Vertebrata Yes 1
Ami-Mir-138-P2 ami-mir-138-2 MIR-138 GCUGGUG MIMAT0038155 MIMAT0038157 NW_017712856.1 274386 274453 + Vertebrata Vertebrata No 1
Bta-Mir-138-P2 bta-mir-138-2 MIR-138 GCUGGUG MIMAT0003813 None NC_037345.1 24910582 24910649 + Vertebrata Vertebrata Yes 1
Cfa-Mir-138-P2 cfa-mir-138b MIR-138 GCUGGUG MIMAT0006646 None chr2 59454084 59454151 - Vertebrata Vertebrata Yes 1 1
Cja-Mir-138-P2 None MIR-138 GCUGGUG None None CM021934.1 11393927 11393997 + Vertebrata Vertebrata Unknown
Cli-Mir-138-P2 cli-mir-138-2 MIR-138 GCUGGUG MIMAT0038522 MIMAT0038524 scaffold123 10795004 10795071 + Vertebrata Vertebrata Yes 1
Cmi-Mir-138-P2 None MIR-138 GCUGGUG None None KI636043.1 666124 666190 - Vertebrata Vertebrata Unknown 1
Cpi-Mir-138-P2 cpi-mir-138 MIR-138 GCUGGUG MIMAT0037760 MIMAT0037761 JH584802 506331 506398 - Vertebrata Vertebrata Yes 1
Cpo-Mir-138-P2 cpo-mir-138-2 MIR-138 GCUGGUG MIMAT0046999 MIMAT0047001 scaffold_22 25185275 25185342 - Vertebrata Vertebrata No 1 1
Dno-Mir-138-P2 dno-mir-138-2 MIR-138 GCUGGUG MIMAT0047648 MIMAT0047650 JH567044 128013 128080 - Vertebrata Vertebrata Yes 1
Dre-Mir-138-P2 dre-mir-138-1 MIR-138 GCUGGUG MIMAT0001835 MIMAT0031973 chr18 17580169 17580236 + Vertebrata Vertebrata Yes 1
Eca-Mir-138-P2 eca-mir-138-1 MIR-138 GCUGGUG MIMAT0012925 None CM009150.1 9900390 9900457 + Vertebrata Vertebrata Yes 1
Ete-Mir-138-P2 None MIR-138 GCUGGUG None None JH980312 28603904 28603971 - Vertebrata Vertebrata Yes 1
Gga-Mir-138-P2 gga-mir-138-2 MIR-138 GCUGGUG MIMAT0001122 MIMAT0031069 11 2044406 2044473 - Vertebrata Vertebrata Yes 1
Gja-Mir-138-P2 None MIR-138 GCUGGUG None None NW_015172574.1 686293 686360 + Vertebrata Vertebrata Yes 1
Gmo-Mir-138-P2 gmo-mir-138-1 MIR-138 GCUGGUG MIMAT0044223 None GeneScaffold_606 3847 3912 - Vertebrata Vertebrata Unknown 1
Hsa-Mir-138-P2 hsa-mir-138-2 MIR-138 GCUGGUG MIMAT0000430 MIMAT0004596 chr16 56858527 56858594 + Vertebrata Vertebrata Yes 1
Laf-Mir-138-P2 None MIR-138 GCUGGUG None None GL010070.1 1155698 1155765 - Vertebrata Vertebrata Unknown 1
Lch-Mir-138-P2 None MIR-138 GCUGGUG None None JH127786.1 563197 563264 - Vertebrata Vertebrata Unknown 1
Loc-Mir-138-P2 None MIR-138 GCUGGUG None None LG23 16132928 16132995 - Vertebrata Vertebrata No 1
Mal-Mir-138-P2 None MIR-138 GCUGGUG None None KV884753.1 2982032 2982099 - Vertebrata Vertebrata Yes 1
Mdo-Mir-138-P2 mdo-mir-138 MIR-138 GCUGGUG MIMAT0004111 None 1 447811949 447812016 + Vertebrata Vertebrata Yes 1
Mml-Mir-138-P2 mml-mir-138 MIR-138 GCUGGUG MIMAT0006194 MIMAT0026822 CM014355.1 44097876 44097943 + Vertebrata Vertebrata Yes 1
Mmr-Mir-138-P2 mmr-mir-138-2 MIR-138 GCUGGUG MIMAT0049141 None CM007680.1 53190292 53190359 + Vertebrata Vertebrata Yes 1
Mmu-Mir-138-P2 mmu-mir-138-2 MIR-138 GCUGGUG MIMAT0000150 MIMAT0016987 chr8 94324312 94324379 + Vertebrata Vertebrata Yes 1
Neu-Mir-138-P2 None MIR-138 GCUGGUG None None CM051813.1 474394341 474394408 + Vertebrata Vertebrata Unknown 1
Oan-Mir-138-P2 oan-mir-138-2 MIR-138 GCUGGUG MIMAT0007216 MIMAT0007220 NC_041738.1 33676105 33676172 + Vertebrata Vertebrata No 1
Ocu-Mir-138-P2 ocu-mir-138-2 MIR-138 GCUGGUG MIMAT0048236 MIMAT0048238 chr5 13100646 13100713 + Vertebrata Vertebrata Yes 1
Pab-Mir-138-P2 None MIR-138 GCUGGUG None None CM054697.2 56123031 56123098 + Vertebrata Vertebrata Yes 1
Pbv-Mir-138-P2 pbv-mir-138-1 MIR-138 GCUGGUG MIMAT0038949 MIMAT0038950 KE955447.1 122451 122518 + Vertebrata Vertebrata Yes 1
Rno-Mir-138-P2 rno-mir-138-2 MIR-138 GCUGGUG MIMAT0000844 MIMAT0017127 chr19 11149754 11149821 - Vertebrata Vertebrata No 1
Sha-Mir-138-P2 sha-mir-138-1 MIR-138 GCUGGUG MIMAT0022771 None GL834650.1 1024477 1024544 + Vertebrata Vertebrata No 1 1
Spt-Mir-138-P2 None MIR-138 GCUGGUG None None QEPC01011631.1 235694 235761 - Vertebrata Vertebrata Unknown 1
Sto-Mir-138-P2 None MIR-138 GCUGGUG None None BFAA01002806.1 176549 176616 + Vertebrata Vertebrata No 1
Tgu-Mir-138-P2 tgu-mir-138-2 MIR-138 GCUGGUG MIMAT0014515 MIMAT0031021 11 4014425 4014492 + Vertebrata Vertebrata No 1
Tni-Mir-138-P2 tni-mir-138 MIR-138 GCUGGUG MIMAT0003080 None 13 1437205 1437272 + Vertebrata Vertebrata Unknown 1
Ebu-Mir-138-P3 None MIR-138 GCUGGUG None None FYBX02010311.1 2672414 2672470 + E. burgeri Vertebrata Yes 1
Ebu-Mir-138-P4 None MIR-138 GCUGGUG None None FYBX02010442.1 4688859 4688919 - E. burgeri Vertebrata Unknown 1 1
Tgu-Mir-2958 tgu-mir-2958 MIR-2958 GCUGGUG MIMAT0014456 None 21 3490993 3491053 + T. guttata T. guttata No 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all