MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-138-P1b

Family name MIR-138 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-138-P1a  Mal-Mir-138-P2 
Orthologues Aca-Mir-138-P1  Ami-Mir-138-P1  Bta-Mir-138-P1  Cfa-Mir-138-P1  Cja-Mir-138-P1  Cli-Mir-138-P1  Cmi-Mir-138-P1  Cpo-Mir-138-P1  Dno-Mir-138-P1  Eca-Mir-138-P1  Ete-Mir-138-P1  Gga-Mir-138-P1  Gja-Mir-138-P1  Gmo-Mir-138-P1b  Hsa-Mir-138-P1  Laf-Mir-138-P1  Lch-Mir-138-P1  Loc-Mir-138-P1  Mdo-Mir-138-P1  Mml-Mir-138-P1  Mmr-Mir-138-P1  Mmu-Mir-138-P1  Mun-Mir-138-P1  Neu-Mir-138-P1  Oan-Mir-138-P1  Ocu-Mir-138-P1  Pab-Mir-138-P1  Pbv-Mir-138-P1  Pma-Mir-138-o1  Rno-Mir-138-P1  Sha-Mir-138-P1  Spt-Mir-138-P1  Sto-Mir-138-P1  Tgu-Mir-138-P1  Xtr-Mir-138-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884804.1: 850113-850173 [-] UCSC Ensembl
Seed GCUGGUG
Precursor
(pre-Mir +30nt flank)		 
GUGGGUGUGUAUGCGAGGGUGGAGAGGGUCAGCUGGUGUUGUGAAUCAGGCCGCUGAAGUGUCAGACACGGCUUUUUCAUAACACCAGGGUUCCUCCCUACCGCUUCCUGCUGGGAUAUAU
Get precursor sequence
Structure
        10          20        30        40        50        60 
GUGGGUGUGUAUGCGAG--|    A     UCAG             UC      CUGAAGU 
                   GGUGG GAGGG    CUGGUGUUGUGAA  AGGCCG       \
                   CCAUC CUCCU    GACCACAAUACUU  UUCGGC       G
UAUAUAGGGUCGUCCUUCG^    C     UGG-             U-      ACAGACU 
 .       110       100        90         80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-138-P1b_5p
mirBase accessionNone
Sequence 
0- AGCUGGUGUUGUGAAUCAGGCCG -23
Get sequence
Star sequence

Mal-Mir-138-P1b_3p*
mirBase accessionNone
Sequence 
40- GCUUUUUCAUAACACCAGGGU -61
Get sequence