MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-138-P1

Family name MIR-138 (all species)
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-138-2
Paralogues Pbv-Mir-138-P2 
Orthologues Aca-Mir-138-P1  Ami-Mir-138-P1  Bta-Mir-138-P1  Cfa-Mir-138-P1  Cja-Mir-138-P1  Cli-Mir-138-P1  Cmi-Mir-138-P1  Cpo-Mir-138-P1  Dno-Mir-138-P1  Dre-Mir-138-P1a  Eca-Mir-138-P1  Ete-Mir-138-P1  Gga-Mir-138-P1  Gja-Mir-138-P1  Gmo-Mir-138-P1a  Gmo-Mir-138-P1b  Hsa-Mir-138-P1  Laf-Mir-138-P1  Lch-Mir-138-P1  Loc-Mir-138-P1  Mal-Mir-138-P1a  Mal-Mir-138-P1b  Mdo-Mir-138-P1  Mml-Mir-138-P1  Mmr-Mir-138-P1  Mmu-Mir-138-P1  Mun-Mir-138-P1  Neu-Mir-138-P1  Oan-Mir-138-P1  Ocu-Mir-138-P1  Pab-Mir-138-P1  Pma-Mir-138-o1  Rno-Mir-138-P1  Sha-Mir-138-P1  Spt-Mir-138-P1  Sto-Mir-138-P1  Tgu-Mir-138-P1  Tni-Mir-138-P1a  Xla-Mir-138-P1c  Xla-Mir-138-P1d  Xtr-Mir-138-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953062.1: 339909-339969 [-]
Seed GCUGGUG
Precursor
(pre-Mir +30nt flank)		 
CGUUCUCCAAAACAUCUGGCUCAGUGUAGCAGCUGGUGUUGUGAAUCAGGCCGUCACCUAUUAGAGAACGGCUACUUCACAACACCAGGGUUGCCCUGUACCACAGACUACUGCCCAUGGA
Get precursor sequence
Structure
        10          20        30        40        50        60 
CGUUCUCCAAAACAUCU--| CU   U     AG             UCA     UCACCUA 
                   GG  CAG GUAGC  CUGGUGUUGUGAA   GGCCG       \
                   CC  GUC CGUUG  GACCACAACACUU   UCGGC       U
AGGUACCCGUCAUCAGACA^ AU   C     G-             CA-     AAGAGAU 
 .       110       100        90         80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Pbv-Mir-138-P1_5p
mirBase accessionMIMAT0038949
Sequence 
0- AGCUGGUGUUGUGAAUCAGGCCG -23
Get sequence
Star sequence

Pbv-Mir-138-P1_3p* (predicted)
mirBase accessionNone
Sequence 
40- GCUACUUCACAACACCAGGGU -61
Get sequence