MirGeneDB ID | Hsa-Let-7-P1b |
Family name |
LET-7 (all species) |
Species |
Human (Homo sapiens) |
MiRBase ID |
hsa-let-7e
|
Paralogues |
Hsa-Let-7-P1c
Hsa-Let-7-P1d
Hsa-Let-7-P2a1
Hsa-Let-7-P2a2
Hsa-Let-7-P2a3
Hsa-Let-7-P2b1
Hsa-Let-7-P2b2
Hsa-Let-7-P2b3
Hsa-Let-7-P2c1
Hsa-Let-7-P2c2
Hsa-Let-7-P2c3
|
Orthologues |
Aae-Let-7
Aca-Let-7-P1b
Aga-Let-7
Agr-Let-7
Ami-Let-7-P1b
Bge-Let-7
Bko-Let-7
Bpl-Let-7
Bta-Let-7-P1b
Cfa-Let-7-P1b
Cin-Let-7-P1
Cja-Let-7-P1b
Cpi-Let-7-P1b
Cpo-Let-7-P1b
Cte-Let-7
Dan-Let-7
Dlo-Let-7
Dma-Let-7
Dme-Let-7
Dmo-Let-7
Dpu-Let-7
Dre-Let-7-P1b1
Dre-Let-7-P1b2
Dsi-Let-7
Dya-Let-7
Eba-Let-7
Eca-Let-7-P1b
Egr-Let-7
Esc-Let-7
Ete-Let-7-P1b
Gja-Let-7-P1b
Gmo-Let-7-P1b1
Gmo-Let-7-P1b2
Gpa-Let-7
Gsa-Let-7
Gsp-Let-7
Hme-Let-7
Hmi-Let-7
Hru-Let-7
Isc-Let-7
Laf-Let-7-P1b
Lan-Let-7
Lch-Let-7-P1b
Lgi-Let-7
Lhy-Let-7
Llo-Let-7
Loc-Let-7-P1b
Mal-Let-7-P1b1
Mal-Let-7-P1b2
Mdo-Let-7-P1b
Mgi-Let-7
Mml-Let-7-P1b
Mmr-Let-7-P1b
Mmu-Let-7-P1b
Mom-Let-7
Mun-Let-7-P1b
Npo-Let-7
Oan-Let-7-P1b
Obi-Let-7
Ocu-Let-7-P1b
Ofu-Let-7
Ovu-Let-7
Pab-Let-7-P1b
Pau-Let-7
Pbv-Let-7-P1b
Pca-Let-7
Pcr-Let-7
Pdu-Let-7
Pfl-Let-7
Ple-Let-7
Pmi-Let-7
Pve-Let-7
Rno-Let-7-P1b
Rph-Let-7
Sha-Let-7-P1b
Sko-Let-7
Sma-Let-7
Sne-Let-7
Snu-Let-7
Spt-Let-7-P1b
Spu-Let-7
Sro-Let-7
Sto-Let-7-P1b
Tca-Let-7
Tni-Let-7-P1b1
Tni-Let-7-P1b2
Tur-Let-7
War-Let-7
Xbo-Let-7
Xla-Let-7-P1b3
Xla-Let-7-P1b4
Xtr-Let-7-P1b
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (hg38) |
chr19: 51692793-51692859 [+]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Let-7-P1b) |
Mir-10-P2b
chr19: 51692618-51692677 [+]
UCSC
Ensembl
Let-7-P1b
chr19: 51692793-51692859 [+]
UCSC
Ensembl
Mir-10-P3b
chr19: 51693268-51693327 [+]
UCSC
Ensembl
|
Seed |
GAGGUAG |
Precursor (pre-Mir +30nt flank) |
GGGUCUGUCCACCUGCCGCGCCCCCCGGGCUGAGGUAGGAGGUUGUAUAGUUGAGGAGGACACCCAAGGAGAUCACUAUACGGCCUCCUAGCUUUCCCCAGGCUGCGCCCUGCACGGGACGGGGCCC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GGGUCUGUCCACCUGCC--| CC C CU G UGAGGAGGACA
GCGC CC GGG GAG UAGGAGGUUGUAUAGU \
CGCG GG CCC UUC AUCCUCCGGCAUAUCA C
CCCGGGGCAGGGCACGUCC^ UC A CU G CUAGAGGAACC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | No |
Tissue expression
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Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
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Mature sequence |
Hsa-Let-7-P1b_5p |
mirBase accession | MIMAT0000066 |
Sequence |
0- UGAGGUAGGAGGUUGUAUAGUU -22
Get sequence
|
Proposed targets |
microrna.org: MIMAT0000066
TargetScanVert: hsa-let-7e-5p
TargetMiner: hsa-let-7e-5p
miRDB: MIMAT0000066
|
Star sequence |
Hsa-Let-7-P1b_3p* |
mirBase accession | MIMAT0004485 |
Sequence |
45- CUAUACGGCCUCCUAGCUUUCC -67
Get sequence
|
Proposed targets |
microrna.org: MIMAT0004485
TargetScanVert: hsa-let-7e-3p
TargetMiner: hsa-let-7e-3p
miRDB: MIMAT0004485
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