MirGeneDB 2.1
MirGeneDB ID

Ocu-Let-7-P1b

Family name LET-7 (all species)
Seed GAGGUAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID
Paralogues Ocu-Let-7-P1c  Ocu-Let-7-P1d  Ocu-Let-7-P2a1  Ocu-Let-7-P2a2  Ocu-Let-7-P2a3  Ocu-Let-7-P2b1  Ocu-Let-7-P2b2  Ocu-Let-7-P2b3  Ocu-Let-7-P2c1  Ocu-Let-7-P2c2  Ocu-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P1b  Ami-Let-7-P1b  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P1b  Cfa-Let-7-P1b  Cgi-Let-7  Cin-Let-7-P1  Cpi-Let-7-P1b  Cpo-Let-7-P1b  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dre-Let-7-P1b1  Dre-Let-7-P1b2  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P1b  Gja-Let-7-P1b  Gmo-Let-7-P1b1  Gmo-Let-7-P1b2  Hme-Let-7  Hsa-Let-7-P1b  Isc-Let-7  Lan-Let-7  Lch-Let-7-P1b  Lgi-Let-7  Loc-Let-7-P1b  Mal-Let-7-P1b1  Mal-Let-7-P1b2  Mdo-Let-7-P1b  Mml-Let-7-P1b  Mmu-Let-7-P1b  Mun-Let-7-P1b  Npo-Let-7  Oan-Let-7-P1b  Obi-Let-7  Ovu-Let-7  Pbv-Let-7-P1b  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P1b  Sha-Let-7-P1b  Sko-Let-7  Spt-Let-7-P1b  Spu-Let-7  Sto-Let-7-P1b  Tca-Let-7  Tni-Let-7-P1b1  Tni-Let-7-P1b2  Xbo-Let-7  Xla-Let-7-P1b3  Xla-Let-7-P1b4  Xtr-Let-7-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(oryCun2_add)
Precursor
(pre-Mir +30nt flank)
UGAGGUAGGAGGUUGUAUAGUUGAGGAGGACACCCGAGGAGAUGACUAUACGGCCUCCUAGCUUUCC
Get precursor sequence
Structure
          10        20           30 
U--   G                 GAGGA---| A 
   GAG UAGGAGGUUGUAUAGUU        GG C
   UUC AUCCUCCGGCAUAUCAG        CC A
CCU   G                 UAGAGGAG^ C 
      60        50        40
Deep sequencing
CommentThere appears to be aspurious 2 nt sequence insertion into the genomic sequence relative to the 5p read and all other family members.
3' NTU No
MotifsNo
Mature sequence

Ocu-Let-7-P1b_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGGAGGUUGUAUAGUU -22
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Star sequence

Ocu-Let-7-P1b_3p*
mirBase accessionNone
Sequence 
45- CUAUACGGCCUCCUAGCUUUCC -67
Get sequence