Mir
Gene
DB
2.1
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91 microRNA genes of family MIR-221
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
▼
UGUG
CNNC
Cmi-Mir-221-P1a
None
MIR-221
GCUCAGU
None
None
KI635858.1
3691581
3691641
-
Gnathostomata
Vertebrata
No
1
1
1
Tni-Mir-221-P1a1
tni-mir-222
MIR-221
GCUACAU
None
MIMAT0002905
CAAE01017358.1_SCAF17358
560
621
-
Clupeocephala
Vertebrata
No
1
1
1
Mal-Mir-221-P1a1
None
MIR-221
GCUACAU
None
None
KV885120.1
273598
273659
+
Clupeocephala
Vertebrata
No
1
1
1
Mal-Mir-221-P2a2
None
MIR-221
GCUACAU
None
None
KV884973.1
417542
417604
+
Clupeocephala
Vertebrata
No
1
1
Xla-Mir-221-P2a3
None
MIR-221
GCUACAU
None
None
NC_030726.1
77927829
77927891
-
X. laevis
Vertebrata
No
1
Ami-Mir-221-P1b
ami-mir-222b
MIR-221
GCUACAU
MIMAT0038256
MIMAT0038257
NW_017708049.1
5891729
5891795
+
Gnathostomata
Vertebrata
Yes
1
1
1
Pbv-Mir-221-P1b
pbv-mir-222b
MIR-221
GCUACAU
MIMAT0039035
MIMAT0039036
KE955174.1
151359
151422
+
Gnathostomata
Vertebrata
Yes
1
1
1
Gja-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
NW_015224181.1
293
356
+
Gnathostomata
Vertebrata
Unknown
1
1
Spt-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
QEPC01014973.1
1516515
1516581
+
Gnathostomata
Vertebrata
Unknown
1
1
1
Pma-Mir-221-P1o1
pma-mir-222
MIR-221
GCUACAU
MIMAT0019533
MIMAT0019534
NC_046138.1
4279200
4279261
-
P. marinus
Vertebrata
No
1
1
Tgu-Mir-221-P1a
tgu-mir-222-1
MIR-221
GCUACAU
MIMAT0026978
MIMAT0014514
1
107894443
107894505
-
Gnathostomata
Vertebrata
No
1
1
Sto-Mir-221-P1a
None
MIR-221
GCUCAGU
None
None
BFAA01004609.1
227955
228015
+
Gnathostomata
Vertebrata
No
1
1
Hsa-Mir-221-P1a
hsa-mir-222
MIR-221
GCUACAU
MIMAT0004569
MIMAT0000279
chrX
45747033
45747096
-
Gnathostomata
Vertebrata
No
1
1
Ami-Mir-221-P1a
ami-mir-222a
MIR-221
GCUACAU
MIMAT0038254
MIMAT0038255
NW_017709793.1
2575748
2575810
+
Gnathostomata
Vertebrata
No
1
1
Mml-Mir-221-P1a
mml-mir-222
MIR-221
GCUACAU
MIMAT0026849
MIMAT0006250
chrX
45880341
45880404
-
Gnathostomata
Vertebrata
No
1
1
Cpi-Mir-221-P1a
cpi-mir-222a
MIR-221
GCUACAU
MIMAT0037852
MIMAT0037853
JH584730
3280756
3280818
-
Gnathostomata
Vertebrata
No
1
1
Mmu-Mir-221-P1a
mmu-mir-222
MIR-221
GCUACAU
MIMAT0017061
MIMAT0000670
chrX
19146900
19146963
-
Gnathostomata
Vertebrata
No
1
1
Aca-Mir-221-P1a
aca-mir-222a
MIR-221
GCUACAU
MIMAT0021891
MIMAT0021892
3
135997332
135997394
-
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-221-P1a
rno-mir-222
MIR-221
GCUACAU
MIMAT0017164
MIMAT0000891
chrX
3683940
3684003
+
Gnathostomata
Vertebrata
No
1
1
Pbv-Mir-221-P1a
pbv-mir-222a
MIR-221
GCUACAU
MIMAT0039033
MIMAT0039034
KE954435.1
197491
197553
+
Gnathostomata
Vertebrata
No
1
1
Cpo-Mir-221-P1a
cpo-mir-222
MIR-221
GCUACAU
MIMAT0047132
MIMAT0047133
scaffold_33
12034584
12034647
+
Gnathostomata
Vertebrata
No
1
1
Gja-Mir-221-P1a
None
MIR-221
GCUACAU
None
None
NW_015165234.1
1525899
1525961
+
Gnathostomata
Vertebrata
No
1
1
Ocu-Mir-221-P1a
ocu-mir-222
MIR-221
GCUACAU
MIMAT0048356
MIMAT0048357
chrX
30973574
30973637
-
Gnathostomata
Vertebrata
No
1
1
Spt-Mir-221-P1a
None
MIR-221
GCUACAU
None
None
QEPC01002784.1
165562
165624
+
Gnathostomata
Vertebrata
Unknown
1
Cfa-Mir-221-P1a
cfa-mir-222
MIR-221
GCUACAU
None
MIMAT0009851
chrX
39524537
39524600
-
Gnathostomata
Vertebrata
No
1
1
Bta-Mir-221-P1a
bta-mir-222
MIR-221
GCUACAU
None
MIMAT0003530
NC_037357.1
98125949
98126012
+
Gnathostomata
Vertebrata
No
1
1
Xtr-Mir-221-P1a
xtr-mir-222
MIR-221
GCUACAU
None
MIMAT0003633
chr2
68930297
68930358
+
Gnathostomata
Vertebrata
No
1
Dno-Mir-221-P1a
dno-mir-222
MIR-221
GCUACAU
MIMAT0047777
MIMAT0047778
JH568173
139430
139493
+
Gnathostomata
Vertebrata
No
1
1
Mun-Mir-221-P1a
None
MIR-221
GCUACAU
None
None
221-P2a_LR594635.1:350792961-350793223
101
163
+
Gnathostomata
Vertebrata
No
1
1
Ete-Mir-221-P1a
None
MIR-221
GCUACAU
None
None
JH980365
7503744
7503807
+
Gnathostomata
Vertebrata
No
1
1
Lch-Mir-221-P1a
None
MIR-221
GCUACAU
None
None
JH127252.1
52334
52395
+
Gnathostomata
Vertebrata
Unknown
1
1
Sha-Mir-221-P1a
sha-mir-222
MIR-221
GCUACAU
None
MIMAT0022796
GL849540.1
1793860
1793923
+
Gnathostomata
Vertebrata
No
1
1
Mdo-Mir-221-P1a
mdo-mir-222a
MIR-221
GCUACAU
None
MIMAT0004159
4
17426702
17426765
+
Gnathostomata
Vertebrata
No
1
1
Oan-Mir-221-P1a
oan-mir-222a
MIR-221
GCUACAU
MIMAT0007132
MIMAT0007133
NC_041745.1
8659576
8659637
+
Gnathostomata
Vertebrata
No
1
1
Gga-Mir-221-P1a
gga-mir-222a
MIR-221
GCUACAU
None
None
1
111966551
111966613
+
Gnathostomata
Vertebrata
No
1
1
Cli-Mir-221-P1a
cli-mir-222a
MIR-221
GCUACAU
MIMAT0038606
MIMAT0038607
scaffold68
1295199
1295261
+
Gnathostomata
Vertebrata
No
1
1
Loc-Mir-221-P1a
None
MIR-221
GCUACAU
None
None
LG17
1032091
1032152
+
Gnathostomata
Vertebrata
No
1
1
Tgu-Mir-221-P2a
tgu-mir-221
MIR-221
GCUACAU
MIMAT0026976
MIMAT0014512
1
107893928
107893990
-
Gnathostomata
Vertebrata
No
1
Sto-Mir-221-P2a
None
MIR-221
CCUGGCA
None
None
BFAA01004609.1
230229
230291
+
Gnathostomata
Vertebrata
No
Hsa-Mir-221-P2a
hsa-mir-221
MIR-221
CCUGGCA
MIMAT0004568
MIMAT0000278
chrX
45746180
45746242
-
Gnathostomata
Vertebrata
No
Ami-Mir-221-P2a
ami-mir-221
MIR-221
CCUGGCA
MIMAT0038252
MIMAT0038253
NW_017709793.1
2576314
2576376
+
Gnathostomata
Vertebrata
No
1
Cmi-Mir-221-P2a
None
MIR-221
CCUGGCA
None
None
KI635858.1
3689867
3689927
-
Gnathostomata
Vertebrata
No
Mml-Mir-221-P2a
mml-mir-221
MIR-221
GCUACAU
MIMAT0026590
MIMAT0002583
chrX
45879484
45879546
-
Gnathostomata
Vertebrata
No
Cpi-Mir-221-P2a
cpi-mir-221
MIR-221
CCUGGCA
MIMAT0037850
MIMAT0037851
JH584730
3280145
3280207
-
Gnathostomata
Vertebrata
No
1
Mmu-Mir-221-P2a
mmu-mir-221
MIR-221
GCUACAU
MIMAT0017060
MIMAT0000669
chrX
19146307
19146369
-
Gnathostomata
Vertebrata
No
Aca-Mir-221-P2a
aca-mir-221
MIR-221
GCUACAU
MIMAT0021889
MIMAT0021890
3
135996388
135996448
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-221-P2a
rno-mir-221
MIR-221
GCUACAU
MIMAT0017163
MIMAT0000890
chrX
3684504
3684566
+
Gnathostomata
Vertebrata
No
Pbv-Mir-221-P2a
pbv-mir-221
MIR-221
GCUACAU
MIMAT0039031
MIMAT0039032
KE954435.1
198745
198806
+
Gnathostomata
Vertebrata
No
Cpo-Mir-221-P2a
cpo-mir-221
MIR-221
GCUACAU
MIMAT0047130
MIMAT0047131
scaffold_33
12035274
12035336
+
Gnathostomata
Vertebrata
No
Gja-Mir-221-P2a
None
MIR-221
GCUACAU
None
None
NW_015165234.1
1526266
1526328
+
Gnathostomata
Vertebrata
No
1
Ocu-Mir-221-P2a
ocu-mir-221
MIR-221
GCUACAU
MIMAT0048354
MIMAT0048355
chrX
30972910
30972972
-
Gnathostomata
Vertebrata
No
Spt-Mir-221-P2a
None
MIR-221
GCUACAU
None
None
QEPC01002784.1
166019
166081
+
Gnathostomata
Vertebrata
Unknown
1
1
Cfa-Mir-221-P2a
cfa-mir-221
MIR-221
GCUACAU
None
MIMAT0006757
chrX
39523889
39523951
-
Gnathostomata
Vertebrata
No
Bta-Mir-221-P2a
bta-mir-221
MIR-221
GCUACAU
None
MIMAT0003529
NC_037357.1
98126639
98126701
+
Gnathostomata
Vertebrata
No
Xtr-Mir-221-P2a
xtr-mir-221
MIR-221
GCUACAU
None
MIMAT0003700
chr2
68930823
68930885
+
Gnathostomata
Vertebrata
No
Dno-Mir-221-P2a
dno-mir-221
MIR-221
GCUACAU
MIMAT0047775
MIMAT0047776
JH568173
140066
140128
+
Gnathostomata
Vertebrata
No
Mun-Mir-221-P2a
None
MIR-221
GCUACAU
None
None
221-P1a3_LR594635.1:350794679-350794940
101
162
+
Gnathostomata
Vertebrata
No
Ete-Mir-221-P2a
None
MIR-221
GCUACAU
None
None
JH980365
7504387
7504449
+
Gnathostomata
Vertebrata
No
Lch-Mir-221-P2a
None
MIR-221
GCUACAU
None
None
JH127252.1
53102
53164
+
Gnathostomata
Vertebrata
Unknown
Sha-Mir-221-P2a
sha-mir-221
MIR-221
GCUACAU
None
MIMAT0022797
GL849540.1
1794451
1794513
+
Gnathostomata
Vertebrata
No
Mdo-Mir-221-P2a
mdo-mir-221
MIR-221
GCUACAU
MIMAT0026701
MIMAT0004160
4
17427286
17427348
+
Gnathostomata
Vertebrata
No
Oan-Mir-221-P2a
oan-mir-221
MIR-221
CCUGGCA
MIMAT0007134
MIMAT0007135
NC_041745.1
8660201
8660263
+
Gnathostomata
Vertebrata
No
Gga-Mir-221-P2a
gga-mir-221
MIR-221
GCUACAU
MIMAT0026494
MIMAT0001108
1
111967061
111967123
+
Gnathostomata
Vertebrata
No
Cli-Mir-221-P2a
cli-mir-221
MIR-221
GCUACAU
MIMAT0038604
MIMAT0038605
scaffold68
1295720
1295782
+
Gnathostomata
Vertebrata
No
1
Loc-Mir-221-P2a
None
MIR-221
GCUACAU
None
None
LG17
1034012
1034074
+
Gnathostomata
Vertebrata
No
1
Ebu-Mir-221-P2e
None
MIR-221
GCUACAU
None
None
FYBX02010127.1
1809220
1809281
-
E. burgeri
Vertebrata
Yes
Gmo-Mir-221-P1a1
gmo-mir-222-2
MIR-221
GCUACAU
MIMAT0044030
MIMAT0044031
contig337589
317
378
+
Clupeocephala
Vertebrata
No
1
Dre-Mir-221-P1a1
dre-mir-222a
MIR-221
GCUCAGU
MIMAT0031927
MIMAT0001289
chr9
33921481
33921542
-
Clupeocephala
Vertebrata
No
1
1
Tni-Mir-221-P2a1
tni-mir-221
MIR-221
GCUACAU
None
MIMAT0002907
CAAE01017358.1_SCAF17358
254
317
-
Clupeocephala
Vertebrata
No
1
1
Gmo-Mir-221-P2a1
gmo-mir-221-1
MIR-221
GCUACAU
MIMAT0044032
MIMAT0044022
contig337589
767
830
+
Clupeocephala
Vertebrata
No
1
Mal-Mir-221-P2a1
None
MIR-221
GCUACAU
None
None
KV885120.1
274060
274123
+
Clupeocephala
Vertebrata
No
1
1
Dre-Mir-221-P2a1
dre-mir-221
MIR-221
GCUACAU
MIMAT0031926
MIMAT0001288
chr9
33920955
33921017
-
Clupeocephala
Vertebrata
No
1
1
Gmo-Mir-221-P1a2
gmo-mir-222-1
MIR-221
GCUACAU
MIMAT0044326
MIMAT0044031
scaffold00071
21723
21784
+
Clupeocephala
Vertebrata
No
1
1
Mal-Mir-221-P1a2
None
MIR-221
GCUACAU
None
None
KV884973.1
417174
417235
+
Clupeocephala
Vertebrata
No
1
Gmo-Mir-221-P2a2
gmo-mir-221-2
MIR-221
GCUACAU
MIMAT0044021
MIMAT0044022
contig307202
158
220
-
Clupeocephala
Vertebrata
No
1
1
Dre-Mir-221-P2a2
None
MIR-221
GCUACAU
None
None
chr6
59901710
59901774
-
Clupeocephala
Vertebrata
No
1
1
Xla-Mir-221-P1a3
None
MIR-221
GCUACAU
None
None
None
None
None
None
X. laevis
Vertebrata
No
Xla-Mir-221-P1a4
xla-mir-222
MIR-221
GCUACAU
MIMAT0046544
MIMAT0046545
None
None
None
None
X. laevis
Vertebrata
No
Xla-Mir-221-P2a4
xla-mir-221
MIR-221
GCUACAU
MIMAT0046542
MIMAT0046543
NC_030727.1
44886234
44886296
+
X. laevis
Vertebrata
No
Sto-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
BFAA01003200.1
196698
196761
-
Gnathostomata
Vertebrata
Yes
1
Cmi-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
KI635856.1
1950754
1950817
+
Gnathostomata
Vertebrata
No
1
Cpi-Mir-221-P1b
cpi-mir-222b
MIR-221
GCUACAU
MIMAT0037854
MIMAT0037855
JH584724
419807
419873
+
Gnathostomata
Vertebrata
Yes
1
1
Aca-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
GL343528.1
405279
405342
+
Gnathostomata
Vertebrata
Yes
1
1
Mun-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
221-P2b_LR594638.1:67393490-67393756
101
167
+
Gnathostomata
Vertebrata
Unknown
1
1
Lch-Mir-221-P1b
None
MIR-221
GCUACAU
None
None
JH126781.1
1065197
1065261
+
Gnathostomata
Vertebrata
Unknown
1
Oan-Mir-221-P1b
oan-mir-222b-1
MIR-221
GCUACAU
MIMAT0007056
MIMAT0007057
NC_041733.1
13691892
13691958
-
Gnathostomata
Vertebrata
Yes
1
1
Gga-Mir-221-P1b
gga-mir-222b
MIR-221
GCUACAU
MIMAT0025617
MIMAT0025618
4
2169328
2169394
+
Gnathostomata
Vertebrata
Yes
1
Dre-Mir-221-P1b
dre-mir-222b
MIR-221
GCUACAU
None
MIMAT0011303
chr21
44568190
44568252
-
Gnathostomata
Vertebrata
No
1
1
Cli-Mir-221-P1b
cli-mir-222b
MIR-221
GCUACAU
None
MIMAT0038608
scaffold72
1257573
1257639
+
Gnathostomata
Vertebrata
Yes
1
1
Loc-Mir-221-P1b
None
MIR-221
CUCAGUA
None
None
LG7
22704992
22705054
-
Gnathostomata
Vertebrata
Yes
1
1
Pma-Mir-221-P2o1
pma-mir-221
MIR-221
GCUACAU
None
MIMAT0019532
NC_046138.1
4278405
4278466
-
P. marinus
Vertebrata
No
1
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