MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-221-P2a2

Family name MIR-221 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-221-P1a1  Dre-Mir-221-P1c  Dre-Mir-221-P2a1 
Orthologues Aca-Mir-221-P2a  Ami-Mir-221-P2a  Bta-Mir-221-P2a  Cfa-Mir-221-P2a  Cja-Mir-221-P2a  Cli-Mir-221-P2a  Cmi-Mir-221-P2a  Cpi-Mir-221-P2a  Cpo-Mir-221-P2a  Dno-Mir-221-P2a  Eca-Mir-221-P2a  Ete-Mir-221-P2a  Gga-Mir-221-P2a  Gja-Mir-221-P2a  Gmo-Mir-221-P2a2  Hsa-Mir-221-P2a  Laf-Mir-221-P2a  Lch-Mir-221-P2a  Loc-Mir-221-P2a  Mal-Mir-221-P2a2  Mdo-Mir-221-P2a  Mml-Mir-221-P2a  Mmr-Mir-221-P2a  Mmu-Mir-221-P2a  Mun-Mir-221-P2a  Neu-Mir-221-P2a  Oan-Mir-221-P2a  Ocu-Mir-221-P2a  Pab-Mir-221-P2a  Pbv-Mir-221-P2a  Rno-Mir-221-P2a  Sha-Mir-221-P2a  Spt-Mir-221-P2a  Sto-Mir-221-P2a  Tgu-Mir-221-P2a  Xtr-Mir-221-P2a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr6: 59901710-59901774 [-] UCSC Ensembl
Seed GCUACAU
Precursor
(pre-Mir +30nt flank)		 
ACACACUGAGAGUAACGGACGCGGCUCUGGCCCUGGCACACAGUGUAUUGGUCUGUGUGUGUGUGUGUCUACAGCUACAUUGUCUGCUGGGUUUCAGAGCCGCUUCAGCACCGCUCCGUCUGCAG
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Structure
        10          20        30         40        50        60   
ACACACUGAGAGUAACG--  C          C-| UG   C       AUU  U    GUGUGU 
                   GA GCGGCUCUGG  CC  GCA ACAGUGU   GG CUGU      G
                   CU CGCCGAGACU  GG  CGU UGUUACA   UC GACA      U
GACGUCUGCCUCGCCACGA  U          UU^ GU   C       ---  -    UCUGUG 
   120       110       100        90        80            70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-221-P2a2_5p*
mirBase accessionNone
Sequence 
0- CCCUGGCACACAGUGUAUUGGUCUGU -26
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Mature sequence

Dre-Mir-221-P2a2_3p
mirBase accessionNone
Sequence 
42- AGCUACAUUGUCUGCUGGGUUUC -65
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