| MirGeneDB ID | Xla-Mir-221-P1a3 |
|---|---|
| Family name | MIR-221 (all species) |
| Seed | GCUACAU |
| Species | African clawed frog (Xenopus laevis) |
| MiRBase ID | |
| Paralogues | Xla-Mir-221-P1a4 Xla-Mir-221-P2a3 Xla-Mir-221-P2a4 |
| Orthologues | Aca-Mir-221-P1a Ami-Mir-221-P1a Bta-Mir-221-P1a Cfa-Mir-221-P1a Cli-Mir-221-P1a Cmi-Mir-221-P1a Cpi-Mir-221-P1a Cpo-Mir-221-P1a Dno-Mir-221-P1a Ete-Mir-221-P1a Gga-Mir-221-P1a Gja-Mir-221-P1a Hsa-Mir-221-P1a Lch-Mir-221-P1a Loc-Mir-221-P1a Mdo-Mir-221-P1a Mml-Mir-221-P1a Mmu-Mir-221-P1a Mun-Mir-221-P1a Oan-Mir-221-P1a Ocu-Mir-221-P1a Pbv-Mir-221-P1a Rno-Mir-221-P1a Sha-Mir-221-P1a Spt-Mir-221-P1a Sto-Mir-221-P1a Tgu-Mir-221-P1a Xtr-Mir-221-P1a |
| Node of Origin (locus) | X. laevis |
| Node of Origin (family) | Vertebrata |
| Genome context (GCF_001663975.1_XLA_v2) |
|
| Precursor (pre-Mir +30nt flank) | CGCUCAGUAAUCAGUGUAGAUCCUGUAUUUCUGUCAGCAGCUACAUCUGGCUACUGGGUCUCGet precursor sequence |
| Structure | 10 20 30 C-- AU -| AUC U U GCUCAGUA CAG UGUAG CUG AU U UGGGUCAU GUC ACAUC GAC UG C CUC CG U^ GAC - U 60 50 40 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Xla-Mir-221-P1a3_5p* |
| mirBase accession | None |
| Sequence |
0- CGCUCAGUAAUCAGUGUAGAUCC -23
Get sequence
|
| Mature sequence | Xla-Mir-221-P1a3_3p |
| mirBase accession | None |
| Sequence |
38- AGCUACAUCUGGCUACUGGGUCUC -62
Get sequence
|
