MirGeneDB 3.0
89 microRNA genes with seed UGUGCUU
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Ebu-Mir-218-P6 None MIR-218 UGUGCUU None None FYBX02008409.1 3657243 3657306 - E. burgeri Vertebrata Unknown 1
Ebu-Mir-218-P5 None MIR-218 UGUGCUU None None FYBX02010432.1 2263972 2264037 + E. burgeri Vertebrata Unknown 1 1
Xla-Mir-218-P4b None MIR-218 UGUGCUU None None NC_030729.1 112018687 112018750 - X. laevis Vertebrata Unknown 1
Xla-Mir-218-P4a None MIR-218 UGUGCUU None None NC_030728.1 26374994 26375057 + X. laevis Vertebrata Unknown 1
Dre-Mir-218-P4 V dre-mir-218a-1 MIR-218 UGUGCUU MIMAT0001868 None chr14 24562809 24562873 - Gnathostomata Vertebrata 1 No
Xtr-Mir-218-P4 xtr-mir-218-2 MIR-218 UGUGCUU MIMAT0003631 None chr3 24052824 24052887 + Gnathostomata Vertebrata Unknown 1
Tni-Mir-218-P4 tni-mir-218a-1 MIR-218 UGUGCUU MIMAT0002994 None 1 5655180 5655244 - Gnathostomata Vertebrata Unknown 1
Tgu-Mir-218-P4 tgu-mir-218-2 MIR-218 UGUGCUU MIMAT0014522 None 13 5379572 5379635 - Gnathostomata Vertebrata Unknown 1
Sto-Mir-218-P4 None MIR-218 UGUGCUU None None BFAA01000179.1 946998 947061 + Gnathostomata Vertebrata Unknown 1
Spt-Mir-218-P4 None MIR-218 UGUGCUU None None QEPC01008745.1 4448882 4448945 + Gnathostomata Vertebrata Unknown 1
Sha-Mir-218-P4 None MIR-218 UGUGCUU None None GL834618.1 2237866 2237929 - Gnathostomata Vertebrata Unknown 1
Rno-Mir-218-P4 rno-mir-218a-2 MIR-218 UGUGCUU MIMAT0000888 MIMAT0004740 chr10 20428685 20428748 + Gnathostomata Vertebrata No 1
Pbv-Mir-218-P4 pbv-mir-218-2 MIR-218 UGUGCUU MIMAT0039027 None KE953426.1 422380 422443 - Gnathostomata Vertebrata Unknown 1
Pab-Mir-218-P4 None MIR-218 UGUGCUU None None CM054683.2 177643537 177643600 - Gnathostomata Vertebrata Unknown 1 1
Ocu-Mir-218-P4 ocu-mir-218-2 MIR-218 UGUGCUU MIMAT0048347 MIMAT0048349 chr3 50155736 50155799 - Gnathostomata Vertebrata Unknown 1
Oan-Mir-218-P4 oan-mir-218-2 MIR-218 UGUGCUU MIMAT0006815 None NC_041749.1 21569479 21569542 + Gnathostomata Vertebrata No 1 1
Mmu-Mir-218-P4 mmu-mir-218-2 MIR-218 UGUGCUU MIMAT0000663 MIMAT0005444 chr11 35616840 35616903 + Gnathostomata Vertebrata No 1
Mmr-Mir-218-P4 mmr-mir-218b MIR-218 UGUGCUU MIMAT0049135 None CM007683.1 5091081 5091144 - Gnathostomata Vertebrata Unknown 1
Mml-Mir-218-P4 mml-mir-218-2 MIR-218 UGUGCUU MIMAT0002574 MIMAT0026589 CM014341.1 166169549 166169612 - Gnathostomata Vertebrata No 1 1
Mdo-Mir-218-P4 mdo-mir-218-2 MIR-218 UGUGCUU MIMAT0004133 MIMAT0031111 1 367287193 367287256 - Gnathostomata Vertebrata No 1
Mal-Mir-218-P4 None MIR-218 UGUGCUU None None KV884774.1 104833 104897 - Gnathostomata Vertebrata Unknown 1
Loc-Mir-218-P4 None MIR-218 UGUGCUU None None LG6 38229124 38229188 + Gnathostomata Vertebrata Unknown
Lch-Mir-218-P4 None MIR-218 UGUGCUU None None JH126669.1 1715766 1715829 - Gnathostomata Vertebrata Unknown 1
Laf-Mir-218-P4 None MIR-218 UGUGCUU None None GL010028.1 91358571 91358634 - Gnathostomata Vertebrata Unknown 1
Hsa-Mir-218-P4 hsa-mir-218-2 MIR-218 UGUGCUU MIMAT0000275 MIMAT0004566 chr5 168768168 168768231 - Gnathostomata Vertebrata No 1 1
Gmo-Mir-218-P4 gmo-mir-218a-1 MIR-218 UGUGCUU MIMAT0044017 MIMAT0044222 GeneScaffold_3401 218692 218757 + Gnathostomata Vertebrata Unknown 1
Gja-Mir-218-P4 None MIR-218 UGUGCUU None None NW_015169213.1 295346 295409 + Gnathostomata Vertebrata Unknown 1
Gga-Mir-218-P4 gga-mir-218-2 MIR-218 UGUGCUU MIMAT0001144 MIMAT0026518 13 5314131 5314194 + Gnathostomata Vertebrata No 1
Ete-Mir-218-P4 None MIR-218 UGUGCUU None None JH980294 62794383 62794446 - Gnathostomata Vertebrata Unknown 1
Eca-Mir-218-P4 eca-mir-218-2 MIR-218 UGUGCUU MIMAT0012928 None CM009161.1 11396076 11396139 + Gnathostomata Vertebrata Unknown 1
Dno-Mir-218-P4 dno-mir-218-2 MIR-218 UGUGCUU MIMAT0047768 MIMAT0047770 JH561766 63098 63161 + Gnathostomata Vertebrata Unknown 1
Cpo-Mir-218-P4 cpo-mir-218-2 MIR-218 UGUGCUU MIMAT0047125 MIMAT0047127 scaffold_17 14934416 14934479 - Gnathostomata Vertebrata No 1
Cpi-Mir-218-P4 cpi-mir-218-2 MIR-218 UGUGCUU MIMAT0037846 MIMAT0037847 JH584664 1595320 1595383 + Gnathostomata Vertebrata Unknown 1
Cmi-Mir-218-P4 None MIR-218 UGUGCUU None None KI635873.1 1470701 1470764 + Gnathostomata Vertebrata No 1
Cli-Mir-218-P4 cli-mir-218-2 MIR-218 UGUGCUU MIMAT0038602 MIMAT0038603 scaffold79 13392693 13392756 + Gnathostomata Vertebrata No 1 1
Cja-Mir-218-P4 None MIR-218 UGUGCUU None None CM021916.1 29703071 29703134 - Gnathostomata Vertebrata Unknown 1 1
Cfa-Mir-218-P4 cfa-mir-218-2 MIR-218 UGUGCUU MIMAT0006672 None chr4 43010775 43010838 + Gnathostomata Vertebrata No 1
Bta-Mir-218-P4 bta-mir-218-2 MIR-218 UGUGCUU MIMAT0003798 None NC_037347.1 554567 554630 - Gnathostomata Vertebrata No 1
Ami-Mir-218-P4 ami-mir-218-2 MIR-218 UGUGCUU MIMAT0038247 None NW_017709751.1 9433977 9434040 + Gnathostomata Vertebrata Unknown 1
Aca-Mir-218-P4 aca-mir-218-2 MIR-218 UGUGCUU MIMAT0021880 None 1 112860800 112860863 - Gnathostomata Vertebrata Unknown 1
Tni-Mir-218-P3 tni-mir-218b MIR-218 UGUGCUU MIMAT0002986 None 4 1554674 1554731 + Gnathostomata Vertebrata Unknown 1 1
Mal-Mir-218-P3 None MIR-218 UGUGCUU None None KV884763.1 576648 576705 + Gnathostomata Vertebrata Unknown 1 1
Loc-Mir-218-P3 None MIR-218 UGUGCUU None None LG1 7975230 7975287 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-218-P3 None MIR-218 UGUGCUU None None JH135808.1 5387 5451 - Gnathostomata Vertebrata Unknown 1
Gmo-Mir-218-P3 gmo-mir-218b MIR-218 UGUGCUU MIMAT0044228 None GeneScaffold_3571 41286 41343 - Gnathostomata Vertebrata Unknown 1 1
Dre-Mir-218-P3 dre-mir-218b MIR-218 UGUGCUU MIMAT0001869 None chr10 17695275 17695332 + Gnathostomata Vertebrata Unknown 1
Xla-Mir-218-P2b None MIR-218 UGUGCUU None None NC_030725.1 19793163 19793226 + X. laevis Vertebrata Unknown 1
Xla-Mir-218-P2a None MIR-218 UGUGCUU None None NC_030724.1 22446440 22446503 + X. laevis Vertebrata Unknown 1
Xtr-Mir-218-P2 xtr-mir-218-1 MIR-218 UGUGCUU MIMAT0003631 None chr1 22730618 22730681 - Gnathostomata Vertebrata Unknown 1
Tni-Mir-218-P2 tni-mir-218a-2 MIR-218 UGUGCUU MIMAT0002994 None 18 234311 234377 + Gnathostomata Vertebrata Unknown
Tgu-Mir-218-P2 tgu-mir-218-1 MIR-218 UGUGCUU MIMAT0014522 MIMAT0026984 4 17124768 17124831 + Gnathostomata Vertebrata Unknown 1
Sto-Mir-218-P2 None MIR-218 UGUGCUU None None BFAA01002126.1 399127 399190 + Gnathostomata Vertebrata Unknown 1
Spt-Mir-218-P2 None MIR-218 UGUGCUU None None QEPC01009607.1 1375812 1375875 - Gnathostomata Vertebrata Unknown 1
Sha-Mir-218-P2 None MIR-218 UGUGCUU None None GL864864.1 3545632 3545695 - Gnathostomata Vertebrata Unknown 1
Rno-Mir-218-P2 rno-mir-218a-1 MIR-218 UGUGCUU MIMAT0000888 MIMAT0017162 chr14 66923105 66923168 - Gnathostomata Vertebrata No 1
Pbv-Mir-218-P2 pbv-mir-218-1 MIR-218 UGUGCUU MIMAT0039027 MIMAT0039028 KE953911.1 123617 123680 - Gnathostomata Vertebrata Unknown 1
Pab-Mir-218-P2 None MIR-218 UGUGCUU None None CM054682.2 19634907 19634970 + Gnathostomata Vertebrata No 1
Ocu-Mir-218-P2 ocu-mir-218-1 MIR-218 UGUGCUU MIMAT0048347 MIMAT0048348 chr2 11156706 11156769 + Gnathostomata Vertebrata Unknown 1
Oan-Mir-218-P2 oan-mir-218-1 MIR-218 UGUGCUU MIMAT0006815 MIMAT0006816 NC_041745.1 37929482 37929545 - Gnathostomata Vertebrata No 1
Neu-Mir-218-P2 None MIR-218 UGUGCUU None None CM051818.1 73287763 73287826 + Gnathostomata Vertebrata Unknown 1
Mun-Mir-218-P2 None MIR-218 UGUGCUU None None LR594633.1 516737466 516737529 + Gnathostomata Vertebrata Unknown 1
Mmu-Mir-218-P2 mmu-mir-218-1 MIR-218 UGUGCUU MIMAT0000663 MIMAT0004665 chr5 48223966 48224029 + Gnathostomata Vertebrata No 1
Mmr-Mir-218-P2 mmr-mir-218a MIR-218 UGUGCUU MIMAT0049215 None CM007664.1 56278624 56278687 + Gnathostomata Vertebrata Unknown 1
Mml-Mir-218-P2 mml-mir-218-1 MIR-218 UGUGCUU MIMAT0002574 MIMAT0031080 CM014340.1 19496253 19496316 + Gnathostomata Vertebrata Unknown 1
Mdo-Mir-218-P2 mdo-mir-218-1 MIR-218 UGUGCUU MIMAT0004133 MIMAT0026680 5 208287249 208287312 - Gnathostomata Vertebrata No 1
Mal-Mir-218-P2 None MIR-218 UGUGCUU None None KV884742.1 2625305 2625371 + Gnathostomata Vertebrata Unknown
Loc-Mir-218-P2 None MIR-218 UGUGCUU None None LG4 9803039 9803102 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-218-P2 None MIR-218 UGUGCUU None None JH127602.1 624123 624186 + Gnathostomata Vertebrata Unknown 1
Laf-Mir-218-P2 None MIR-218 UGUGCUU None None GL010045.1 20102477 20102540 + Gnathostomata Vertebrata Unknown 1
Hsa-Mir-218-P2 hsa-mir-218-1 MIR-218 UGUGCUU MIMAT0000275 MIMAT0004565 chr4 20528299 20528362 + Gnathostomata Vertebrata No 1
Gmo-Mir-218-P2 gmo-mir-218a-2 MIR-218 UGUGCUU MIMAT0044017 None contig203168 55 120 - Gnathostomata Vertebrata Unknown
Gja-Mir-218-P2 None MIR-218 UGUGCUU None None NW_015175973.1 717056 717119 - Gnathostomata Vertebrata Unknown 1
Gga-Mir-218-P2 gga-mir-218-1 MIR-218 UGUGCUU MIMAT0001144 MIMAT0026518 4 75040862 75040925 - Gnathostomata Vertebrata No 1
Ete-Mir-218-P2 None MIR-218 UGUGCUU None None JH980315 42341141 42341204 - Gnathostomata Vertebrata Unknown 1
Eca-Mir-218-P2 eca-mir-218-1 MIR-218 UGUGCUU MIMAT0012928 None CM009150.1 105377068 105377131 - Gnathostomata Vertebrata Unknown 1
Dre-Mir-218-P2 dre-mir-218a-2 MIR-218 UGUGCUU MIMAT0001868 None chr1 23866891 23866954 + Gnathostomata Vertebrata No 1
Dno-Mir-218-P2 dno-mir-218-1 MIR-218 UGUGCUU MIMAT0047768 MIMAT0047769 JH581835 1866685 1866748 - Gnathostomata Vertebrata Unknown 1
Cpo-Mir-218-P2 cpo-mir-218-1 MIR-218 UGUGCUU MIMAT0047125 MIMAT0047126 scaffold_73 4592625 4592688 + Gnathostomata Vertebrata Unknown 1
Cpi-Mir-218-P2 cpi-mir-218-1 MIR-218 UGUGCUU MIMAT0037846 None JH585774 30856 30919 + Gnathostomata Vertebrata Unknown 1
Cmi-Mir-218-P2 None MIR-218 UGUGCUU None None KI635865.1 4423431 4423494 + Gnathostomata Vertebrata Unknown 1
Cli-Mir-218-P2 cli-mir-218-1 MIR-218 UGUGCUU MIMAT0038602 MIMAT0038603 scaffold38 14206876 14206939 - Gnathostomata Vertebrata No 1
Cja-Mir-218-P2 None MIR-218 UGUGCUU None None CM021917.1 169504950 169505013 - Gnathostomata Vertebrata Unknown 1
Cfa-Mir-218-P2 cfa-mir-218-1 MIR-218 UGUGCUU MIMAT0006672 None chr3 89044709 89044772 - Gnathostomata Vertebrata No 1
Bta-Mir-218-P2 bta-mir-218-1 MIR-218 UGUGCUU MIMAT0003798 None NC_037333.1 40087154 40087217 + Gnathostomata Vertebrata No 1
Ami-Mir-218-P2 ami-mir-218-1 MIR-218 UGUGCUU MIMAT0038247 None NW_017707947.1 21902018 21902081 + Gnathostomata Vertebrata Unknown 1
Aca-Mir-218-P2 aca-mir-218-1 MIR-218 UGUGCUU MIMAT0021880 MIMAT0021881 5 75691624 75691687 - Gnathostomata Vertebrata Unknown 1
Pma-Mir-218-o3 pma-mir-218b MIR-218 UGUGCUU MIMAT0019531 None NC_046079.1 14082498 14082561 - P. marinus Vertebrata Unknown
Pma-Mir-218-o2 pma-mir-218a-2 MIR-218 UGUGCUU MIMAT0019529 None NC_046077.1 12174144 12174213 - P. marinus Vertebrata Unknown 1
Pma-Mir-218-o1 pma-mir-218a-1 MIR-218 UGUGCUU MIMAT0019529 MIMAT0019530 NC_046098.1 3240022 3240078 + P. marinus Vertebrata Unknown 1

(red - mature/co-mature, blue - star)

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