| MirGeneDB ID | Mml-Mir-218-P2 |
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| Family name |
MIR-218 (all species) |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-218-1
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| Paralogues |
Mml-Mir-218-P4
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| Orthologues |
Aca-Mir-218-P2
Ami-Mir-218-P2
Bta-Mir-218-P2
Cfa-Mir-218-P2
Cja-Mir-218-P2
Cli-Mir-218-P2
Cmi-Mir-218-P2
Cpi-Mir-218-P2
Cpo-Mir-218-P2
Dno-Mir-218-P2
Dre-Mir-218-P2
Eca-Mir-218-P2
Ete-Mir-218-P2
Gga-Mir-218-P2
Gja-Mir-218-P2
Gmo-Mir-218-P2
Hsa-Mir-218-P2
Laf-Mir-218-P2
Lch-Mir-218-P2
Loc-Mir-218-P2
Mal-Mir-218-P2
Mdo-Mir-218-P2
Mmr-Mir-218-P2
Mmu-Mir-218-P2
Mun-Mir-218-P2
Neu-Mir-218-P2
Oan-Mir-218-P2
Ocu-Mir-218-P2
Pab-Mir-218-P2
Pbv-Mir-218-P2
Pma-Mir-218-o2
Rno-Mir-218-P2
Sha-Mir-218-P2
Spt-Mir-218-P2
Sto-Mir-218-P2
Tgu-Mir-218-P2
Tni-Mir-218-P2
Xla-Mir-218-P2a
Xla-Mir-218-P2b
Xtr-Mir-218-P2
|
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014340.1: 19496253-19496316 [+]
UCSC
Ensembl
|
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| Seed |
UGUGCUU |
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Precursor
(pre-Mir +30nt flank) |
GGUGUAGUGACAAUGUAGCGAGAUUUUCUGUUGUGCUUGAUCUAACCAUGUGGUUGCGAGGUAUGAGUAAAACAUGGUUCCGUCAAGCACCAUGGAACGUCACGCAGCUUUCUACAGCAUGGCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GGUGUAGUGACAAUGUA--| A U U CU GGUUGCGAG
GCG GAU UUCUGU GUGCUUGAU AACCAUGU G
CGC CUG AAGGUA CACGAACUG UUGGUACA U
ACGGUACGACAUCUUUCGA^ A C C CC AAAUGAGUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There are Dicer cuts ranging from +1 to +4 on both arms but this represents the highest mature form across most vertebrates. |
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Mature sequence |
Mml-Mir-218-P2_5p |
| mirBase accession | MIMAT0002574 |
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| Sequence |
0- UUGUGCUUGAUCUAACCAUGU -21
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-218-5p
|
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| Star sequence |
Mml-Mir-218-P2_3p* |
| mirBase accession | MIMAT0031080 |
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| Sequence |
43- AUGGUUCCGUCAAGCACCAUG -64
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-218-1-3p
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