MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-218-P2

Family name MIR-218 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-218-P4 
Orthologues Aca-Mir-218-P2  Ami-Mir-218-P2  Bta-Mir-218-P2  Cfa-Mir-218-P2  Cja-Mir-218-P2  Cli-Mir-218-P2  Cpi-Mir-218-P2  Cpo-Mir-218-P2  Dno-Mir-218-P2  Dre-Mir-218-P2  Eca-Mir-218-P2  Ete-Mir-218-P2  Gga-Mir-218-P2  Gja-Mir-218-P2  Gmo-Mir-218-P2  Hsa-Mir-218-P2  Laf-Mir-218-P2  Lch-Mir-218-P2  Loc-Mir-218-P2  Mal-Mir-218-P2  Mdo-Mir-218-P2  Mml-Mir-218-P2  Mmr-Mir-218-P2  Mmu-Mir-218-P2  Mun-Mir-218-P2  Neu-Mir-218-P2  Oan-Mir-218-P2  Ocu-Mir-218-P2  Pab-Mir-218-P2  Pbv-Mir-218-P2  Pma-Mir-218-o2  Rno-Mir-218-P2  Sha-Mir-218-P2  Spt-Mir-218-P2  Sto-Mir-218-P2  Tgu-Mir-218-P2  Tni-Mir-218-P2  Xla-Mir-218-P2a  Xla-Mir-218-P2b  Xtr-Mir-218-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635865.1: 4423431-4423494 [+] UCSC Ensembl
Seed UGUGCUU
Precursor
(pre-Mir +30nt flank)		 
UGCGGUUCUGGGACUCAGCGGGAUUUUUCGUUGUGCUUGAUCUAACCAUGUGGUUGCAAGGUACGAAUAAAACAUGGUUCUGUCAAGCACCAUGGAACGUCACGUAGCCUUCUACAGCAUGCUC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UGCGGUUCUGGGACUCA--|  G   U      U         CU        GGUUGCAAG 
                   GCG GAU UUUCGU GUGCUUGAU  AACCAUGU         G
                   UGC CUG AAGGUA CACGAACUG  UUGGUACA         U
CUCGUACGACAUCUUCCGA^  A   C      C         UC        AAAUAAGCA 
  120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-218-P2_5p
mirBase accessionNone
Sequence 
0- UUGUGCUUGAUCUAACCAUGUG -22
Get sequence
Star sequence

Cmi-Mir-218-P2_3p* (predicted)
mirBase accessionNone
Sequence 
42- CAUGGUUCUGUCAAGCACCAUG -64
Get sequence