MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-218-P4

Family name MIR-218 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-218-P2 
Orthologues Aca-Mir-218-P4  Ami-Mir-218-P4  Bta-Mir-218-P4  Cfa-Mir-218-P4  Cja-Mir-218-P4  Cli-Mir-218-P4  Cpi-Mir-218-P4  Cpo-Mir-218-P4  Dno-Mir-218-P4  Dre-Mir-218-P4-v1  Eca-Mir-218-P4  Ete-Mir-218-P4  Gga-Mir-218-P4  Gja-Mir-218-P4  Gmo-Mir-218-P4  Hsa-Mir-218-P4  Laf-Mir-218-P4  Lch-Mir-218-P4  Loc-Mir-218-P4  Mal-Mir-218-P4  Mdo-Mir-218-P4  Mml-Mir-218-P4  Mmr-Mir-218-P4  Mmu-Mir-218-P4  Oan-Mir-218-P4  Ocu-Mir-218-P4  Pab-Mir-218-P4  Pbv-Mir-218-P4  Rno-Mir-218-P4  Sha-Mir-218-P4  Spt-Mir-218-P4  Sto-Mir-218-P4  Tgu-Mir-218-P4  Tni-Mir-218-P4  Xla-Mir-218-P4a  Xla-Mir-218-P4b  Xtr-Mir-218-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635873.1: 1470701-1470764 [+] UCSC Ensembl
Seed UGUGCUU
Precursor
(pre-Mir +30nt flank)		 
ACCGGCUCUGAAUCUGGGCGAGAUGUUCUGUUGUGCUUGAUCUAACCAUGUGCUUCCAAGGUAUGAGUAAAACAUGGUUUUGUCAAGCACCAUGGGACGUCUCGUGUCUUUCUGCAGCAUGAUC
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Structure
        10          20        30        40        50        60 
ACCGGCUCUGAAUCUGG--|             U         CU        GCUUCCAAG 
                   GCGAGAUGUUCUGU GUGCUUGAU  AACCAUGU         G
                   UGCUCUGCAGGGUA CACGAACUG  UUGGUACA         U
CUAGUACGACGUCUUUCUG^             C         UU        AAAUGAGUA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-218-P4_5p
mirBase accessionNone
Sequence 
0- UUGUGCUUGAUCUAACCAUGUG -22
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Star sequence

Cmi-Mir-218-P4_3p*
mirBase accessionNone
Sequence 
42- CAUGGUUUUGUCAAGCACCAUG -64
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