MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-218-P4

Family name MIR-218 (all species)
Seed UGUGCUU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-218-2
Paralogues Hsa-Mir-218-P2 
Orthologues Aca-Mir-218-P4  Ami-Mir-218-P4  Bta-Mir-218-P4  Cfa-Mir-218-P4  Cli-Mir-218-P4  Cmi-Mir-218-P4  Cpi-Mir-218-P4  Cpo-Mir-218-P4  Dno-Mir-218-P4  Dre-Mir-218-P4-v1  Dre-Mir-218-P4-v2  Ete-Mir-218-P4  Gga-Mir-218-P4  Gja-Mir-218-P4  Gmo-Mir-218-P4  Lch-Mir-218-P4  Loc-Mir-218-P4  Mal-Mir-218-P4  Mdo-Mir-218-P4  Mml-Mir-218-P4  Mmu-Mir-218-P4  Oan-Mir-218-P4  Ocu-Mir-218-P4  Pbv-Mir-218-P4  Rno-Mir-218-P4  Sha-Mir-218-P4  Spt-Mir-218-P4  Sto-Mir-218-P4  Tgu-Mir-218-P4  Tni-Mir-218-P4  Xla-Mir-218-P4a  Xla-Mir-218-P4b  Xtr-Mir-218-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr5: 168768168-168768231 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACUCUGACCAGUCGCUGCGGGGCUUUCCUUUGUGCUUGAUCUAACCAUGUGGUGGAACGAUGGAAACGGAACAUGGUUCUGUCAAGCACCGCGGAAAGCACCGUGCUCUCCUGCAGCAUGGCC
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Structure
        10          20        30        40        50        60 
GACUCUGACCAGUCGCU--|   G       UUU         CU        GGUGGAACG 
                   GCGG GCUUUCC   GUGCUUGAU  AACCAUGU         A
                   UGCC CGAAAGG   CACGAACUG  UUGGUACA         U
CCGGUACGACGUCCUCUCG^   A       CGC         UC        AGGCAAAGG 
  120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-218-P4_5p

mirBase accessionMIMAT0000275
Sequence
0- UUGUGCUUGAUCUAACCAUGU -21
Get sequence
Proposed targets microrna.org: MIMAT0000275
TargetScanVert: hsa-miR-218-5p
TargetMiner: hsa-miR-218-5p
miRDB: MIMAT0000275
Star sequence

Hsa-Mir-218-P4_3p*

mirBase accessionMIMAT0004566
Sequence
43- AUGGUUCUGUCAAGCACCGCG -64
Get sequence
Proposed targets microrna.org: MIMAT0004566
TargetScanVert: hsa-miR-218-2-3p
TargetMiner: hsa-miR-218-2-3p
miRDB: MIMAT0004566