MirGeneDB 2.1
MirGeneDB ID

Oan-Mir-218-P4

Family name MIR-218 (all species)
Seed UGUGCUU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-218-2
Paralogues Oan-Mir-218-P2 
Orthologues Aca-Mir-218-P4  Ami-Mir-218-P4  Bta-Mir-218-P4  Cfa-Mir-218-P4  Cli-Mir-218-P4  Cmi-Mir-218-P4  Cpi-Mir-218-P4  Cpo-Mir-218-P4  Dno-Mir-218-P4  Dre-Mir-218-P4-v1  Dre-Mir-218-P4-v2  Ete-Mir-218-P4  Gga-Mir-218-P4  Gja-Mir-218-P4  Gmo-Mir-218-P4  Hsa-Mir-218-P4  Lch-Mir-218-P4  Loc-Mir-218-P4  Mal-Mir-218-P4  Mdo-Mir-218-P4  Mml-Mir-218-P4  Mmu-Mir-218-P4  Ocu-Mir-218-P4  Pbv-Mir-218-P4  Rno-Mir-218-P4  Sha-Mir-218-P4  Spt-Mir-218-P4  Sto-Mir-218-P4  Tgu-Mir-218-P4  Tni-Mir-218-P4  Xla-Mir-218-P4a  Xla-Mir-218-P4b  Xtr-Mir-218-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041749.1: 21569479-21569542 [+]
Precursor
(pre-Mir +30nt flank)
ACUGACUCUGACUGGCCAUGGGGCUUUCCUUUGUGCUUGAUCUAACCAUGUGGUGGAACAAUAUAAACAGAACAUGGUUCUGUCAAGCACCACGGAAGGCUCCGUGUUUUCCUGCAGCAUGGCC
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Structure
        10          20        30        40        50        60 
ACUGACUCUGACUGGCC--|           UUU         CU        GGUGGAACA 
                   AUGGGGCUUUCC   GUGCUUGAU  AACCAUGU         A
                   UGCCUCGGAAGG   CACGAACUG  UUGGUACA         U
CCGGUACGACGUCCUUUUG^           CAC         UC        AGACAAAUA 
  120       110       100        90        80        70
Deep sequencing
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CommentThe MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-218-P4_5p
mirBase accessionMIMAT0006815
Sequence 
0- UUGUGCUUGAUCUAACCAUGUG -22
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Co-mature sequence

Oan-Mir-218-P4_3p
mirBase accessionNone
Sequence 
42- CAUGGUUCUGUCAAGCACCACG -64
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