MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-218-o3

Family name MIR-218 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-218b
Paralogues Pma-Mir-218-o1  Pma-Mir-218-o2 
Orthologues Dre-Mir-218-P3  Gmo-Mir-218-P3  Lch-Mir-218-P3  Loc-Mir-218-P3  Mal-Mir-218-P3  Tni-Mir-218-P3 
Node of Origin (locus) P. marinus
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046079.1: 14082498-14082561 [-] UCSC Ensembl
Seed UGUGCUU
Precursor
(pre-Mir +30nt flank)		 
GCUCCUCAUGGAUCCCCGCGCGGUUUUCCGUUGUGCUUGAUCUAACCAUGCGAUGGGGAGCUACAGUAACACCAUGGUUCUGUCAAGCACCACGGGACGCCGCACAUGCGAGCUCCGCUAAACC
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Structure
        10          20        30        40        50        60 
GCUCCUCAUGGAUCCCCGC--|    U      U         CU       CGAUGGGGAG 
                     GCGGU UUCCGU GUGCUUGAU  AACCAUG          C
                     CGCCG AGGGCA CACGAACUG  UUGGUAC          U
CCAAAUCGCCUCGAGCGUACA^    C      C         UC       CACAAUGACA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-218-o3_5p
mirBase accessionMIMAT0019531
Sequence 
0- UUGUGCUUGAUCUAACCAUGCG -22
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Star sequence

Pma-Mir-218-o3_3p* (predicted)
mirBase accessionNone
Sequence 
42- CAUGGUUCUGUCAAGCACCACG -64
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