MirGeneDB 3.0
108 microRNA genes with seed CACCGGG
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Tur-Mir-36-P36 None MIR-36 CACCGGG None None HE587309.1 1097086 1097144 + T. urticae Protostomia No 1
Tur-Mir-36-P35 None MIR-36 GGUGGCU None None HE587309.1 1096984 1097043 + T. urticae Protostomia No 1
Tur-Mir-36-P34 None MIR-36 GGUGGCU None None HE587309.1 1096882 1096941 + T. urticae Protostomia No 1
Tur-Mir-36-P33 None MIR-36 GGUGGCU None None HE587309.1 1096578 1096637 + T. urticae Protostomia No 1
Tur-Mir-36-P32 None MIR-36 GGUGGCU None None HE587309.1 1096476 1096535 + T. urticae Protostomia No 1
Tur-Mir-36-P31 None MIR-36 GGUGGCU None None HE587309.1 1096273 1096332 + T. urticae Protostomia No 1
Tur-Mir-36-P30 None MIR-36 GGUGGCU None None HE587309.1 1096172 1096231 + T. urticae Protostomia No 1
Ava-Mir-36-P29b None MIR-36 CACCGGG None None CP075495.1 11035731 11035793 - A. vaga Protostomia No
Ava-Mir-36-P29a None MIR-36 CACCGGG None None CP075494.1 8328530 8328592 + A. vaga Protostomia No
Ava-Mir-36-P28b None MIR-36 CACCGGG None None CP075496.1 5842105 5842163 - A. vaga Protostomia No
Ava-Mir-36-P28a None MIR-36 CACCGGG None None CP075493.1 7621756 7621814 - A. vaga Protostomia No 1
Ava-Mir-36-P27 None MIR-36 CACCGGG None None CP075493.1 6879147 6879208 + A. vaga Protostomia No
Ava-Mir-36-P26b None MIR-36 CACCGGG None None CP075496.1 5842400 5842464 - A. vaga Protostomia No
Ava-Mir-36-P26a None MIR-36 CACCGGG None None CP075493.1 7622005 7622069 - A. vaga Protostomia No
Pca-Mir-36-P25 None MIR-36 CACCGGG None None KQ715408.1 303392 303448 + P. caudatus Protostomia Unknown 1
Pca-Mir-36-P24 None MIR-36 CACCGGG None None KQ715408.1 303221 303277 + P. caudatus Protostomia Unknown 1 1
Pca-Mir-36-P23 None MIR-36 CACCGGG None None KQ715408.1 303049 303105 + P. caudatus Protostomia Unknown 1
Sne-Mir-36-P22 None MIR-36 CACCGGG None None k141_5132 25589 25695 + S. nebaliae Protostomia No 1
Sne-Mir-36-P21 None MIR-36 CACCGGG None None k141_5132 25382 25520 + S. nebaliae Protostomia No 1
Sme-Mir-36-P20b sme-mir-36a MIR-36 CACCGGG MIMAT0003981 MIMAT0003982 NNSW01000019_dd_Smes_g4_19 7234834 7234895 + S. mediterranea Protostomia No 1
Sme-Mir-36-P20a sme-mir-36c MIR-36 CACCGGG MIMAT0012158 MIMAT0011261 NNSW01000019_dd_Smes_g4_19 7234307 7234370 + S. mediterranea Protostomia No 1 1
Sme-Mir-36-P19 sme-mir-36b MIR-36 CACCGGG MIMAT0012141 MIMAT0011242 NNSW01000045_dd_Smes_g4_45 2342053 2342111 - S. mediterranea Protostomia No
Bko-Mir-36-P18b None MIR-36 CACCGGG None None PJRA01000493.1 855209 855270 - B. koreanus Protostomia No
Bko-Mir-36-P18a None MIR-36 CACCGGG None None PJRA01000036.1 34336 34397 + B. koreanus Protostomia No
Bpl-Mir-36-P18 None MIR-36 CACCGGG None None QEOQ01000180.1 141350 141410 - Brachionus Protostomia No
Bpl-Mir-36-P17 None MIR-36 CACCGGG None None QEOQ01000180.1 141460 141519 - B. plicatilis Protostomia No 1
Bko-Mir-36-P16b None MIR-36 CACCGGG None None PJRA01000493.1 855453 855508 - B. koreanus Protostomia No
Bko-Mir-36-P16a None MIR-36 CACCGGG None None PJRA01000036.1 34094 34149 + B. koreanus Protostomia No
Bpl-Mir-36-P16 None MIR-36 CACCGGG None None QEOQ01000180.1 141578 141633 - Brachionus Protostomia No
Ovu-Mir-36-P15 None MIR-36 CACCGGG None None RXHP01026523.1 149169 149231 + Coleoidea Protostomia No
Obi-Mir-36-P15 None MIR-36 CACCGGG None None KQ419452 306979 307041 + Coleoidea Protostomia No
Esc-Mir-36-P15 None MIR-36 CACCGGG None None CM044508.1 49501410 49501467 - Coleoidea Protostomia No
Ovu-Mir-36-P14 None MIR-36 CACCGGG None None RXHP01026523.1 148436 148500 + Coleoidea Protostomia No 1 1 1
Obi-Mir-36-P14 None MIR-36 CACCGGG None None KQ419452 306348 306412 + Coleoidea Protostomia No 1 1 1
Esc-Mir-36-P14 None MIR-36 CACCGGG None None CM044508.1 49502213 49502274 - Coleoidea Protostomia No
Lpo-Mir-36-P12 None MIR-36 CACCGGG None None NW_013671891.1 17371 17431 + L. polyphemus Protostomia Unknown 1
Lpo-Mir-36-P11 None MIR-36 CACCGGG None None NW_013666253.1 359278 359336 + L. polyphemus Protostomia Unknown 1
Efe-Mir-36-P10 None MIR-36 CACCGGG None None Efet.01.229867 2803 2864 + E. fetida Protostomia No
Efe-Mir-36-P9 None MIR-36 CACCGGG None None Efet.01.42296 4397 4458 + E. fetida Protostomia No 1
Cel-Mir-36-P8 cel-mir-42 MIR-36 CACCGGG MIMAT0015095 MIMAT0000013 chrII 11889823 11889891 + C. elegans Protostomia No
Cel-Mir-36-P7 cel-mir-41 MIR-36 CACCGGG MIMAT0020770 MIMAT0000012 chrII 11538324 11538389 + C. elegans Protostomia No
Cel-Mir-36-P6 cel-mir-40 MIR-36 CACCGGG MIMAT0020307 MIMAT0000011 chrII 11538199 11538260 + C. elegans Protostomia No
Cel-Mir-36-P5 cel-mir-39 MIR-36 CACCGGG MIMAT0020306 MIMAT0000010 chrII 11538103 11538164 + C. elegans Protostomia No 1
Cel-Mir-36-P4 cel-mir-38 MIR-36 CACCGGG MIMAT0020305 MIMAT0000009 chrII 11537949 11538011 + C. elegans Protostomia No
Cel-Mir-36-P3 cel-mir-37 MIR-36 CACCGGG MIMAT0015094 MIMAT0000008 chrII 11537854 11537914 + C. elegans Protostomia No
Cel-Mir-36-P2 cel-mir-36 MIR-36 CACCGGG MIMAT0020304 MIMAT0000007 chrII 11537732 11537794 + C. elegans Protostomia No
Cel-Mir-36-P1 cel-mir-35 MIR-36 CACCGGG MIMAT0020303 MIMAT0000006 chrII 11537629 11537689 + C. elegans Protostomia No
Gsa-Mir-36-o39 gsa-mir-36 MIR-36 CACCGGG MIMAT0035258 MIMAT0035259 scf7180006952682 32348 32411 - G. salaris Protostomia No 1
Gsa-Mir-36-o38 None MIR-36 CACCGGG None None scf7180006952682 33007 33101 - G. salaris Protostomia No
Egr-Mir-36-o37 egr-mir-36b MIR-36 CACCGGG MIMAT0041237 MIMAT0041238 APAU02000003.1 597055 597139 + E. granulosus Protostomia Unknown 1
Egr-Mir-36-o36 egr-mir-36a MIR-36 CACCGGG MIMAT0041191 MIMAT0041192 APAU02000028.1 704590 704664 + E. granulosus Protostomia No
Sma-Mir-36-o35 sma-mir-36b MIR-36 CACCGGG MIMAT0033514 MIMAT0033515 HE601624.3 72204878 72204977 - S. mansoni Protostomia No 1
Sma-Mir-36-o34 sma-mir-36a MIR-36 CACCGGG MIMAT0032137 MIMAT0025041 HE601624.3 72169272 72169343 - S. mansoni Protostomia No
Asu-Mir-36-o32 asu-mir-5348 MIR-36 CACCGGG MIMAT0021548 MIMAT0021549 Scaffold123 289846 289901 - A.suum Protostomia No 1
Asu-Mir-36-o31 asu-mir-36f MIR-36 CACCGGG MIMAT0021546 MIMAT0021547 trace_ANBK02000051 101 169 + A.suum Protostomia No
Asu-Mir-36-o30 asu-mir-36d MIR-36 CACCGGG MIMAT0021445 MIMAT0021446 Scaffold730 215044 215101 + A.suum Protostomia No 1
Asu-Mir-36-o29 V asu-mir-36c MIR-36 CACCGGG MIMAT0021443 MIMAT0021444 trace_ANBK02000028 101 160 + A.suum Protostomia 2 No
Asu-Mir-36-o28 asu-mir-36b MIR-36 CACCGGG MIMAT0021441 MIMAT0021442 Scaffold800 98613 98672 - A.suum Protostomia No
Asu-Mir-36-o27 asu-mir-36a MIR-36 CACCGGG MIMAT0021439 MIMAT0021440 Scaffold561 396486 396545 - A.suum Protostomia No 1
Cbr-Mir-36-o25 cbr-mir-42 MIR-36 CACCGGG None MIMAT0000467 II 8891373 8891435 - C. briggsae Protostomia No
Cbr-Mir-36-o24 cbr-mir-41b MIR-36 CACCGGG None MIMAT0011489 II 8378068 8378133 + C. briggsae Protostomia No
Cbr-Mir-36-o23 cbr-mir-41a MIR-36 CACCGGG None MIMAT0001318 II 8378304 8378369 + C. briggsae Protostomia No
Cbr-Mir-36-o22 cbr-mir-40 MIR-36 CACCGGG None MIMAT0001317 II 8377946 8378013 + C. briggsae Protostomia No 1
Cbr-Mir-36-o21 cbr-mir-39 MIR-36 CACCGGG None MIMAT0001316 II 8377847 8377908 + C. briggsae Protostomia No
Cbr-Mir-36-o19 cbr-mir-36 MIR-36 CACCGGG None MIMAT0001314 II 8377574 8377633 + C. briggsae Protostomia No
Cbr-Mir-36-o18 cbr-mir-35g-3 MIR-36 CACCGGG None MIMAT0029919 X 15374070 15374131 + C. briggsae Protostomia No
Cbr-Mir-36-o17 cbr-mir-35g-2 MIR-36 CACCGGG None MIMAT0029919 X 15374624 15374686 + C. briggsae Protostomia No 1
Cbr-Mir-36-o16 cbr-mir-35g-1 MIR-36 CACCGGG None MIMAT0029919 X 15374480 15374545 + C. briggsae Protostomia No
Cbr-Mir-36-o15 cbr-mir-35f MIR-36 CACCGGG None MIMAT0029918 X 15371011 15371072 + C. briggsae Protostomia No 1
Cbr-Mir-36-o14 cbr-mir-35e MIR-36 CACCGGG None MIMAT0011468 X 15371290 15371352 + C. briggsae Protostomia No
Cbr-Mir-36-o13 cbr-mir-35d MIR-36 CACCGGG MIMAT0011469 MIMAT0011470 II 8378188 8378247 + C. briggsae Protostomia No
Cbr-Mir-36-o12 cbr-mir-35c-2 MIR-36 CACCGGG None MIMAT0011467 X 15375015 15375077 + C. briggsae Protostomia No
Cbr-Mir-36-o11 cbr-mir-35c-1 MIR-36 CACCGGG None MIMAT0011467 X 15370852 15370914 + C. briggsae Protostomia No 1
Cbr-Mir-36-o10 cbr-mir-35b-13 MIR-36 CACCGGG None MIMAT0011483 X 15373788 15373849 + C. briggsae Protostomia No
Cbr-Mir-36-o9 cbr-mir-35b-11 MIR-36 CACCGGG None MIMAT0011483 X 15373482 15373545 + C. briggsae Protostomia No
Cbr-Mir-36-o8c cbr-mir-35b-12 MIR-36 CACCGGG None MIMAT0011483 X 15372864 15372926 + C. briggsae Protostomia No 1
Cbr-Mir-36-o8b cbr-mir-35b-9 MIR-36 CACCGGG None MIMAT0011483 X 15373179 15373241 + C. briggsae Protostomia No 1
Cbr-Mir-36-o8a cbr-mir-35b-7 MIR-36 CACCGGG None MIMAT0011483 X 15373647 15373709 + C. briggsae Protostomia No
Cbr-Mir-36-o7c cbr-mir-35b-10 MIR-36 CACCGGG None MIMAT0011483 X 15372700 15372762 + C. briggsae Protostomia No
Cbr-Mir-36-o7b cbr-mir-35b-8 MIR-36 CACCGGG None MIMAT0011483 X 15373015 15373077 + C. briggsae Protostomia No
Cbr-Mir-36-o7a cbr-mir-35b-6 MIR-36 CACCGGG None MIMAT0011483 X 15373330 15373392 + C. briggsae Protostomia No 1
Cbr-Mir-36-o6 cbr-mir-35b-5 MIR-36 CACCGGG None MIMAT0011483 X 15372549 15372611 + C. briggsae Protostomia No 1
Cbr-Mir-36-o5 cbr-mir-35b-4 MIR-36 CACCGGG None MIMAT0011483 X 15372356 15372417 + C. briggsae Protostomia No
Cbr-Mir-36-o4 cbr-mir-35b-3 MIR-36 CACCGGG None MIMAT0011483 X 15372216 15372277 + C. briggsae Protostomia No 1
Cbr-Mir-36-o3 cbr-mir-35b-2 MIR-36 CACCGGG None MIMAT0011483 X 15372046 15372108 + C. briggsae Protostomia No 1
Cbr-Mir-36-o2 cbr-mir-35b-1 MIR-36 CACCGGG None MIMAT0011483 X 15371151 15371212 + C. briggsae Protostomia No
Cbr-Mir-36-o1 cbr-mir-35a MIR-36 CACCGGG None MIMAT0001313 II 8378426 8378486 + C. briggsae Protostomia No
War-Mir-36 None MIR-36 CACCGGG None None WNLI01006131.1 1144 1203 - Protostomia Protostomia Unknown 1
Tca-Mir-36 tca-mir-3791 MIR-36 CACCGGG MIMAT0018882 MIMAT0018883 LG5 7457551 7457607 + Protostomia Protostomia No 1
Snu-Mir-36 None MIR-36 CACCGGG None None CM049310.1 58918107 58918165 + Protostomia Protostomia Unknown 1
Rph-Mir-36 None MIR-36 CACCGGG None None CM018535.1 14872558 14872617 + Protostomia Protostomia Unknown
Pve-Mir-36 None MIR-36 CACCGGG None None Pve_Chr4 175790131 175790189 - Protostomia Protostomia Unknown 1
Pcr-Mir-36 None MIR-36 CACCGGG None None CAJQUW010016050.1 89588 89648 + Protostomia Protostomia No 1
Pau-Mir-36 None MIR-36 CACCGGG None None NMRA01000011.1 340936 340993 - Protostomia Protostomia No 1 1
Ofu-Mir-36 None MIR-36 CACCGGG None None CAIIXF020000001.1 23393833 23393889 - Protostomia Protostomia No 1
Npo-Mir-36 None MIR-36 CACCGGG None None JACATO010000666.1 32488 32550 + Protostomia Protostomia Unknown
Mom-Mir-36 None MIR-36 CACCGGG None None JARFOD010156139.1 1416 1477 - Protostomia Protostomia Unknown 1
Mgi-Mir-36 None MIR-36 CACCGGG None None scaffold43988 9126 9185 - Protostomia Protostomia No 1
Llo-Mir-36 None MIR-36 CACCGGG None None OU343010.1 12798634 12798693 + Protostomia Protostomia No 1
Lhy-Mir-36 None MIR-36 CACCGGG None None scaffold518599_14.4 570 628 - Protostomia Protostomia Unknown 1
Gsp-Mir-36 None MIR-36 CACCGGG None None OX940786.1 10640159 10640238 + Protostomia Protostomia Unknown
Eba-Mir-36 None MIR-36 CACCGGG None None WURV02176288.1 5998 6052 + Protostomia Protostomia Unknown
Dpu-Mir-36 None MIR-36 CACCGGG None None DAPPUscaffold_32 68520 68579 - Protostomia Protostomia No 1
Dma-Mir-36 None MIR-36 CACCGGG None None NC_046175.1 6285796 6285856 - Protostomia Protostomia No 1
Dlo-Mir-36 None MIR-36 CACCGGG None None NC_087241.1 4526388 4526443 - Protostomia Protostomia No 1
Dgr-Mir-36 None MIR-36 CACCGGG None None CAJFCJ010000005.1 1338816 1338875 + Protostomia Protostomia Unknown 1
Cte-Mir-36 cte-mir-36 MIR-36 CACCGGG None MIMAT0013530 CAPTEscaffold_19 701730 701789 - Protostomia Protostomia No 1
Agr-Mir-36 None MIR-36 CACCGGG None None JABBOT010000013.1 13308386 13308446 + Protostomia Protostomia Unknown 1

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