MirGeneDB 3.0
MirGeneDB ID

Sne-Mir-36-P21

Family name MIR-36 (all species)
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues Sne-Mir-36-P22 
Orthologues Agr-Mir-36  Bge-Mir-36  Cbr-Mir-36-o21  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) S. nebaliae
Node of Origin (family) Protostomia
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)		 k141_5132: 25382-25520 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-36-P21)		 Mir-36-P21 k141_5132: 25382-25520 [+] Ensembl
Mir-36-P22 k141_5132: 25589-25695 [+] Ensembl
Seed CACCGGG
Precursor
(pre-Mir +30nt flank)		 
AGCACUCUUAUCAAUUAUACGAUGAUCGGAGGAUGAAUGUUUCACGGUUGAUGUUGUUUAUUUGUAUUCAAUUUCAUAUGAAUCCCACUCGCUGAAGUUCAAUUCAUAUUUAAUUUGAAUUCAUUAAAUUUUAUUCCUUAUUUCGCAUCACCGGGUUUCACACAUCCUCUGACUUCGUAUCAACAACGACUACUUCUCU
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Structure
        10           20        30        40         50        60        70        80        90         
AGCACUCUUAUCAAUUA---|    UGA          AA  UU-  A    U    UUGUUUAUUUGUAUUCAAUUUCAUAUGAAUCCCACUCGCUGAAGU 
                    UACGA   UCGGAGGAUG  UG   UC CGGU GAUG                                             U
                    AUGCU   AGUCUCCUAC  AC   GG GCCA CUAC                                             C
UCUCUUCAUCAGCAACAACU^    UC-          AC  UUU  -    -    GCUUUAUUCCUUAUUUUAAAUUACUUAAGUUUAAUUUAUACUUAA 
       190       180        170       160        150        140       130       120       110       100
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Po
Star sequence

Sne-Mir-36-P21_5p*
mirBase accessionNone
Sequence 
0- GGAUGAAUGUUUCACGGUUGAUG -23
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Mature sequence

Sne-Mir-36-P21_3p
mirBase accessionNone
Sequence 
117- UCACCGGGUUUCACACAUCCUC -139
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