MirGeneDB 3.0
MirGeneDB ID

Sne-Mir-36-P22

Family name MIR-36 (all species)
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues Sne-Mir-36-P21 
Orthologues Agr-Mir-36  Bge-Mir-36  Cbr-Mir-36-o22  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) S. nebaliae
Node of Origin (family) Protostomia
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)		 k141_5132: 25589-25695 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-36-P22)		 Mir-36-P21 k141_5132: 25382-25520 [+] Ensembl
Mir-36-P22 k141_5132: 25589-25695 [+] Ensembl
Seed CACCGGG
Precursor
(pre-Mir +30nt flank)		 
CAUUUCAAUUCAAAUCGAAGAUUCAUUGCUGGAGAGUGUAUCUACGGGUCGACAUUGUCUUUGUACUCAUUCUUUUUAUAAGAAUUGUCAAGAAUUUAUUCUUCUUACUUUAUGUCACCGGGUACUACACUUUCCCACAAAGAUUCCUUCAUCUCAUCAUUCAUUUA
Get precursor sequence
Structure
        10          20        30        40         50        60        70        80   
CAUUUCAAUUCAAAUCGAA--| U  A   CU          UC   G-   C    UUGUCUUUGUACUCAUUCUUUUUAUAAG 
                     GA UC UUG  GGAGAGUGUA  UAC  GGU GACA                            A
                     CU AG AAC  CCUUUCACAU  AUG  CCA CUGU                            A
AUUUACUUACUACUCUACUUC^ U  A   AC          C-   GG   -    AUUUCAUUCUUCUUAUUUAAGAACUGUU 
     160       150       140       130        120        110       100        90
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Po
Star sequence

Sne-Mir-36-P22_5p*
mirBase accessionNone
Sequence 
0- GGAGAGUGUAUCUACGGGUCGACA -24
Get sequence
Mature sequence

Sne-Mir-36-P22_3p
mirBase accessionNone
Sequence 
84- UCACCGGGUACUACACUUUCCCA -107
Get sequence