MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-36-P18

Family name MIR-36 (all species)
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-36-P16  Bpl-Mir-36-P17 
Orthologues Agr-Mir-36  Bge-Mir-36  Bko-Mir-36-P18a  Bko-Mir-36-P18b  Cbr-Mir-36-o18  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) Brachionus
Node of Origin (family) Protostomia
Genome context
(Bpl_ASM1027981)		 QEOQ01000180.1: 141350-141410 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-36-P18)		 Mir-36-P18 QEOQ01000180.1: 141350-141410 [-] Ensembl
Mir-36-P17 QEOQ01000180.1: 141460-141519 [-] Ensembl
Mir-36-P16 QEOQ01000180.1: 141578-141633 [-] Ensembl
Seed CACCGGG
Precursor
(pre-Mir +30nt flank)		 
UCUAUGUCUGUUGAGUCUUGGUGCUCGUUGAGCAAGUGUAGCUUGUGUUAUGUGGUUCUGUAAUUCAUCACCGGGUUUUCACACUUGCCAAACGACAUCAUGCCUUGUCAANNNNNNNNNN
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Structure
        10           20        30           40        50         
UCUAUGUCUGUUGAGUCU---     C     GA        ---|     U  U   UGGUUC 
                     UGGUG UCGUU  GCAAGUGU   AGCUUG GU AUG      \
                     ACUAC AGCAA  CGUUCACA   UUGGGC CA UAC      U
NNNNNNNNNNAACUGUUCCGU     -     AC        CUU^     -  C   UUAAUG 
 .       110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Bpl-Mir-36-P18_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCAAGUGUAGCUUGUGUUAUG -22
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Mature sequence

Bpl-Mir-36-P18_3p
mirBase accessionNone
Sequence 
37- UCACCGGGUUUUCACACUUGCCAA -61
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