MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-36-P16

Family name MIR-36 (all species)
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-36-P17  Bpl-Mir-36-P18 
Orthologues Agr-Mir-36  Bge-Mir-36  Bko-Mir-36-P16a  Bko-Mir-36-P16b  Cbr-Mir-36-o16  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) Brachionus
Node of Origin (family) Protostomia
Genome context
(Bpl_ASM1027981)		 QEOQ01000180.1: 141578-141633 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-36-P16)		 Mir-36-P18 QEOQ01000180.1: 141350-141410 [-] Ensembl
Mir-36-P17 QEOQ01000180.1: 141460-141519 [-] Ensembl
Mir-36-P16 QEOQ01000180.1: 141578-141633 [-] Ensembl
Seed CACCGGG
Precursor
(pre-Mir +30nt flank)		 
UCAAAUGAAUGAAUAGGCGCAUUGAUUAGUGUCGAGUGAUGACCCAGGUUAUGACGAGAUAUCAUCACCGGGUCUACACUUGCCACUAAUCUCGCUUUCAAUAGCAUCCAACGCAG
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Structure
        10           20        30        40        50        
UCAAAUGAAUGAAUAGGC---| AUU        U      AU     A   U   ACGA 
                     GC   GAUUAGUG CGAGUG  GACCC GGU AUG    \
                     CG   CUAAUCAC GUUCAC  CUGGG CCA UAC    G
GACGCAACCUACGAUAACUUU^ CU-        C      AU     -   C   UAUA 
    110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Bpl-Mir-36-P16_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUCGAGUGAUGACCCAGGUUAUG -23
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Mature sequence

Bpl-Mir-36-P16_3p
mirBase accessionNone
Sequence 
34- UCACCGGGUCUACACUUGCCAC -56
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