MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-36-P10

Family name MIR-36 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-36-P9 
Orthologues Agr-Mir-36  Bge-Mir-36  Cbr-Mir-36-o10  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.229867: 2803-2864 [+]
Seed CACCGGG
Precursor
(pre-Mir +30nt flank)		 
UUUUAAGCGGAAGGAAGUGCUCUGUCGCCCGGUGAAUGCAUUCUGGGUACGAUGUCGAAACGAUUAGUCAUCACCGGGUUUGUAUUCAUCCGGGUUCCAGAAGAACCAAGCUACGCAUGCGC
Get precursor sequence
Structure
        10        20         30         40        50        60 
UUUUAAGCGGAAGGAAGUGC-    UC      -|       UU  G   AC    UCGAAA 
                     UCUG  GCCCGG UGAAUGCA  CU GGU  GAUG      C
                     AGAC  UGGGCC ACUUAUGU  GG CCA  CUAC      G
CGCGUACGCAUCGAACCAAGA    CU      U^       UU  G   --    UGAUUA 
120       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To
Star sequence

Efe-Mir-36-P10_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUGAAUGCAUUCUGGGUACGAUG -24
Get sequence
Mature sequence

Efe-Mir-36-P10_3p
mirBase accessionNone
Sequence 
40- UCACCGGGUUUGUAUUCAUCCG -62
Get sequence