MirGeneDB 3.0
77 microRNA genes with seed AAAUGCA
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Efe-Mir-219-P8 None MIR-219 GAUUGUC None None Efet.01.56519 3866 3931 - E. fetida Bilateria No 1
Aae-Mir-277 aae-mir-277 MIR-277 AAAUGCA MIMAT0014210 MIMAT0014211 supercont1.265 508812 508882 + Protostomia Protostomia No 1
Aga-Mir-277 aga-mir-277 MIR-277 AAAUGCA None MIMAT0001510 NC_064601.1 28080086 28080155 - Protostomia Protostomia No 1 1
Agr-Mir-277 None MIR-277 AAAUGCA None None JABBOT010000003.1 2851524 2851583 + Protostomia Protostomia No 1
Bge-Mir-277 None MIR-277 AAAUGCA None None KZ615986.1 42014 42078 - Protostomia Protostomia No
Bko-Mir-277 None MIR-277 AAAUGCA None None PJRA01000048.1 2654569 2654636 - Protostomia Protostomia No
Bpl-Mir-277 None MIR-277 AAAUGCA None None QEOQ01000345.1 1249687 1249753 + Protostomia Protostomia No
Cel-Mir-277 cel-mir-232 MIR-277 AAAUGCA MIMAT0020777 MIMAT0000287 chrIV 10994184 10994248 - Protostomia Protostomia No
Dan-Mir-277 dan-mir-277 MIR-277 AAAUGCA None MIMAT0008407 scaffold_13340 6489013 6489076 + Protostomia Protostomia No 1
Dlo-Mir-277 None MIR-277 AAAUGCA None None NC_087236.1 5467266 5467326 + Protostomia Protostomia No 1
Dma-Mir-277 None MIR-277 AAAUGCA None None NC_046180.1 8461501 8461567 + Protostomia Protostomia No 1
Dme-Mir-277 dme-mir-277 MIR-277 AAAUGCA MIMAT0020804 MIMAT0000338 3R 10100039 10100102 + Protostomia Protostomia No 1
Dmo-Mir-277 dmo-mir-277 MIR-277 AAAUGCA None MIMAT0008685 scaffold_6540 11885111 11885174 - Protostomia Protostomia No 1
Dpu-Mir-277 None MIR-277 AAAUGCA None None DAPPUscaffold_4 1242975 1243041 - Protostomia Protostomia No 1
Dsi-Mir-277 dsi-mir-277 MIR-277 AAAUGCA None MIMAT0008850 3R 15122728 15122791 - Protostomia Protostomia No 1
Dya-Mir-277 dya-mir-277 MIR-277 AAAUGCA None MIMAT0009099 3R 9973491 9973554 + Protostomia Protostomia No 1
Eba-Mir-277 None MIR-277 AAAUGCA None None WURV02156954.1 2850 2911 - Protostomia Protostomia No 1
Efe-Mir-277 None MIR-277 AAAUGCA None None Efet.01.213770 120 185 + Protostomia Protostomia No 1
Esc-Mir-277 None MIR-277 AAAUGCA None None CM044492.1 83674415 83674477 - Protostomia Protostomia No 1 1
Gpa-Mir-277 None MIR-277 AAAUGCA None None Scaffold190 179087 179153 + Protostomia Protostomia No 1 1
Gsp-Mir-277 None MIR-277 AAAUGCA None None OX940787.1 18939975 18940034 + Protostomia Protostomia No
Hme-Mir-277 hme-mir-277 MIR-277 AAAUGCA None MIMAT0024959 HE667979 12468 12551 - Protostomia Protostomia No 1
Hru-Mir-277 None MIR-277 AAAUGCA None None JALGQA010000024.1 8013843 8013905 + Protostomia Protostomia No 1 1
Isc-Mir-277 None MIR-277 AAAUGCA None None NW_024609835.1 44973543 44973605 - Protostomia Protostomia No 1
Lgi-Mir-277 None MIR-277 AAAUGCA None None LOTGIsca_10 1145805 1145865 + Protostomia Protostomia No 1 1
Llo-Mir-277 None MIR-277 AAAUGCA None None OU343009.1 15441204 15441260 - Protostomia Protostomia No 1
Mgi-Mir-277 None MIR-277 AAAUGCA None None scaffold622 474084 474143 + Protostomia Protostomia No 1
Mom-Mir-277 None MIR-277 AAAUGCA None None JARFOD010079624.1 1473 1533 + Protostomia Protostomia No 1
Npo-Mir-277 None MIR-277 AAAUGCA None None JACATO010000333.1 1081096 1081159 - Protostomia Protostomia Unknown 1 1
Obi-Mir-277 None MIR-277 AAAUGCA None None KQ416874 242811 242875 + Protostomia Protostomia No 1
Ovu-Mir-277 None MIR-277 AAAUGCA None None RXHP01059229.1 3761 3825 + Protostomia Protostomia No 1
Pau-Mir-277 None MIR-277 AAAUGCA None None NMRA01001323.1 17513 17571 + Protostomia Protostomia No 1
Pca-Mir-277 None MIR-277 AAAUGCA None None KQ716145.1 1734 1792 - Protostomia Protostomia No
Pcr-Mir-277 None MIR-277 AAAUGCA None None CAJQUW010014576.1 49472 49531 + Protostomia Protostomia No 1
Pdu-Mir-277 None MIR-277 AAAUGCA None None JAPTHN010000004.1 52020821 52020880 + Protostomia Protostomia No 1 1 1
Pve-Mir-277 None MIR-277 AAAUGCA None None Pve_Chr1 328149629 328149686 - Protostomia Protostomia No 1 1
Rph-Mir-277 None MIR-277 AAAUGCA None None CM018531.1 6739135 6739193 - Protostomia Protostomia No 1
Sne-Mir-277 None MIR-277 AAAUGCA None None k141_1391 25825 25919 - Protostomia Protostomia No
Snu-Mir-277 None MIR-277 AAAUGCA None None CM049322.1 46119125 46119181 - Protostomia Protostomia Unknown 1 1
Tca-Mir-277 tca-mir-277 MIR-277 AAAUGCA MIMAT0019124 MIMAT0008382 LG7 14498469 14498537 + Protostomia Protostomia No 1
Tur-Mir-277 None MIR-277 AAAUGCA None None HE587302.1 4477146 4477214 + Protostomia Protostomia No
War-Mir-277 None MIR-277 AAAUGCA None None WNLI01047893.1 4374 4435 - Protostomia Protostomia No 1
Cte-Mir-277-P1 cte-mir-277a MIR-277 AAAUGCA None MIMAT0013531 CAPTEscaffold_114 443887 443966 - C. teleta Protostomia No 1 1
Cte-Mir-277-P2 cte-mir-277b MIR-277 AAAUGCA None MIMAT0013575 CAPTEscaffold_114 443745 443810 - C. teleta Protostomia No 1
Lan-Mir-277-P3 None MIR-277 AAAUGCA None None LFEI01002950 1521 1587 + L. anatina Protostomia No 1 1
Lan-Mir-277-P4 None MIR-277 AAAUGCA None None LFEI01002950 1829 1895 + L. anatina Protostomia No 1 1
Lan-Mir-277-P5 None MIR-277 AAAUGCA None None LFEI01001564 14238 14304 - L. anatina Protostomia No 1 1
Cbr-Mir-277-P6a cbr-mir-232-1 MIR-277 AAAUGCA None MIMAT0000497 IV 7400660 7400721 + C. briggsae Protostomia No
Cbr-Mir-277-P6b cbr-mir-232-2 MIR-277 AAAUGCA None MIMAT0000497 IV 8370520 8370581 - C. briggsae Protostomia No
Egr-Mir-277-P7 egr-mir-4989 MIR-277 AAAUGCA MIMAT0037433 MIMAT0020250 APAU02000001.1 2377193 2377267 + Tricladida + Neodermata Protostomia No 1
Sma-Mir-277-P7 None MIR-277 AAAUGCA None None HE601627.3 36604211 36604356 + Tricladida + Neodermata Protostomia No 1 1
Sme-Mir-277-P7a sme-mir-277b MIR-277 AAAUGCA MIMAT0004008 MIMAT0004009 NNSW01000140_dd_Smes_g4_140 655258 655315 - S. mediterranea Protostomia No 1
Sme-Mir-277-P7b sme-mir-277d MIR-277 AAAUGCA MIMAT0012128 MIMAT0004024 NNSW01000268_dd_Smes_g4_268 448831 448887 - S. mediterranea Protostomia No
Egr-Mir-277-P8 egr-mir-277a MIR-277 AAAUGCA None MIMAT0020247 APAU02000001.1 2377323 2377401 + Tricladida + Neodermata Protostomia No 1
Gsa-Mir-277-P8 gsa-mir-277a MIR-277 AAAUGCA MIMAT0035296 MIMAT0035297 scf7180006947706 6212 6270 + Tricladida + Neodermata Protostomia No 1
Sma-Mir-277-P8 None MIR-277 AAAUGCA None None HE601627.3 36604484 36604621 + Tricladida + Neodermata Protostomia No 1 1
Sme-Mir-277-P8a sme-mir-277a MIR-277 AAAUGCA MIMAT0012119 MIMAT0004007 NNSW01000140_dd_Smes_g4_140 654964 655022 - S. mediterranea Protostomia No
Sme-Mir-277-P8b sme-mir-277c MIR-277 AAAUGCA MIMAT0012120 MIMAT0004010 NNSW01000268_dd_Smes_g4_268 448715 448777 - S. mediterranea Protostomia No 1
Egr-Mir-277-P9 egr-mir-277b MIR-277 AAAUGCA MIMAT0041734 MIMAT0041735 APAU02000012.1 779202 779268 + Neodermata Protostomia No 1 1
Gsa-Mir-277-P9 gsa-mir-277b MIR-277 AAAUGCA MIMAT0035310 MIMAT0035311 scf7180006952241 4154 4223 - Neodermata Protostomia No 1 1
Ava-Mir-277-P10 None MIR-277 AAAUGCA None None CP075496.1 6772799 6772860 - A. vaga Protostomia No 1
Ava-Mir-277-P11 None MIR-277 AAAUGCA None None CP075493.1 6239105 6239166 + A. vaga Protostomia No 1
Lpo-Mir-277-P12 None MIR-277 AAAUGCA None None NW_013666266.1 398631 398690 + L. polyphemus Protostomia No 1
Lpo-Mir-277-P13 None MIR-277 AAAUGCA None None NW_013666308.1 207630 207689 + L. polyphemus Protostomia No 1
Lpo-Mir-277-P14 None MIR-277 AAAUGCA None None NW_013668938.1 55215 55274 + L. polyphemus Protostomia No 1
Lpo-Mir-277-P15 None MIR-277 AAAUGCA None None NW_013671198.1 49812 49871 + L. polyphemus Protostomia No
Lpo-Mir-277-P16 None MIR-277 AAAUGCA None None NW_013668400.1 23780 23838 - L. polyphemus Protostomia No
Lpo-Mir-277-P17 None MIR-277 AAAUGCA None None NW_013665692.1 440255 440315 + L. polyphemus Protostomia No 1 1
Csc-Mir-277-P18a None MIR-277 AAAUGCA None None NW_019384483.1 601078 601139 - C. sculpturatus Protostomia No 1
Csc-Mir-277-P18b None MIR-277 AAAUGCA None None NW_019384483.1 591286 591347 - C. sculpturatus Protostomia No 1
Dgr-Mir-277-P19 None MIR-277 AAAUGCA None None CAJFCJ010000007.1 3991474 3991530 - D. gyrociliatus Protostomia Unknown 1
Dgr-Mir-277-P20 None MIR-277 AAAUGCA None None CAJFCJ010000008.1 873975 874031 - D. gyrociliatus Protostomia Unknown 1
Dgr-Mir-277-P21 None MIR-277 AAAUGCA None None CAJFCJ010000011.1 145433 145532 + D. gyrociliatus Protostomia Unknown 1
Ofu-Mir-277-P22 None MIR-277 AAAUGCA None None CAIIXF020000010.1 35255866 35255921 - O. fusiformis Protostomia No 1 1
Ofu-Mir-277-P23 None MIR-277 AAAUGCA None None CAIIXF020000010.1 35254985 35255041 - O. fusiformis Protostomia No 1
Sha-Mir-7262-P5 None MIR-7262 AAAUGCA None None GL867598.1 1359395 1359452 - Marsupialia Marsupialia No
Lhy-Novel-2 None LHY-NOVEL-2 AAAUGCA None None scaffold83642_29.1 1363 1424 + L. hyalina L. hyalina No 1

(red - mature/co-mature, blue - star)

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