MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7262-P5

Family name MIR-7262 (all species)
Seed AAAUGCA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7262-P1  Sha-Mir-7262-P2  Sha-Mir-7262-P3  Sha-Mir-7262-P4  Sha-Mir-7262-P6  Sha-Mir-7262-P7 
Orthologues Mdo-Mir-7262-P5 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL867598.1: 1359395-1359452 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUGCCAGAUGUGACAGUACACGGUGUCCCGAAAGUCUUGAUGCAAUUUUAGCAAUUAAAGUGUAAAAAUGCACUAAGACUUUUAGGACACCCUGCACAUACAGUGUUCUGCAUCUG
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Structure
        10          20        30        40        50        
UUCUGCCAGAUGUGACA--| A  C       CG         A    A     GCAAU 
                   GU CA GGUGUCC  AAAGUCUUG UGCA UUUUA     U
                   CA GU CCACAGG  UUUCAGAAU ACGU AAAAU     A
GUCUACGUCUUGUGACAUA^ C  C       AU         C    A     GUGAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7262-P5_5p*

mirBase accessionNone
Sequence
0- CGAAAGUCUUGAUGCAAUUUUA -22
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Mature sequence

Sha-Mir-7262-P5_3p

mirBase accessionNone
Sequence
36- AAAAUGCACUAAGACUUUUAGG -58
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