MirGeneDB ID | Sha-Mir-7262-P5 |
Family name |
MIR-7262 (all species) |
Seed |
AAAUGCA |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
|
Paralogues |
Sha-Mir-7262-P1
Sha-Mir-7262-P2
Sha-Mir-7262-P3
Sha-Mir-7262-P4
Sha-Mir-7262-P6
Sha-Mir-7262-P7
|
Orthologues |
Mdo-Mir-7262-P5
|
Node of Origin (locus) |
S. harrisii
|
Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL867598.1: 1359395-1359452 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCUGCCAGAUGUGACAGUACACGGUGUCCCGAAAGUCUUGAUGCAAUUUUAGCAAUUAAAGUGUAAAAAUGCACUAAGACUUUUAGGACACCCUGCACAUACAGUGUUCUGCAUCUG
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCUGCCAGAUGUGACA--| A C CG A A GCAAU
GU CA GGUGUCC AAAGUCUUG UGCA UUUUA U
CA GU CCACAGG UUUCAGAAU ACGU AAAAU A
GUCUACGUCUUGUGACAUA^ C C AU C A GUGAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Sha-Mir-7262-P5_5p* |
mirBase accession | None |
Sequence |
0- CGAAAGUCUUGAUGCAAUUUUA -22
Get sequence
|
Mature sequence |
Sha-Mir-7262-P5_3p |
mirBase accession | None |
Sequence |
36- AAAAUGCACUAAGACUUUUAGG -58
Get sequence
|