MirGeneDB ID | Sha-Mir-7262-P3 |
Family name |
MIR-7262 (all species) |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
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Paralogues |
Sha-Mir-7262-P1
Sha-Mir-7262-P2
Sha-Mir-7262-P4
Sha-Mir-7262-P5
Sha-Mir-7262-P6
Sha-Mir-7262-P7
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Orthologues |
Mdo-Mir-7262-P3
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL861705.1: 2852365-2852418 [-]
UCSC
Ensembl
|
Seed |
UCAAGCA |
Precursor (pre-Mir +30nt flank) |
GAUUGGUGUUCCUGAGUGCAGGUGUCCCAAAAGUCUCAGUGCAGCUGGAAGUUUUUAUCCGCCUCAAGCAGCACUAAGACUUUUGGGACACUCUGUCGAAUCCAUUCUUGAUGA
Get precursor sequence
|
Structure | 10 20 30 40 50
GAUUGGUGUUCCUGAGU- -| C A G A UUU
GCAG GUGUCCCAAAAGUCU AGUGC GCU GA GU U
UGUC CACAGGGUUUUCAGA UCACG CGA CU CG A
AGUAGUUCUUACCUAAGC U^ A A A C CCU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
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Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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Star sequence |
Sha-Mir-7262-P3_5p* |
mirBase accession | None |
Sequence |
0- AAGUCUCAGUGCAGCUGGAAGU -22
Get sequence
|
Mature sequence |
Sha-Mir-7262-P3_3p |
mirBase accession | None |
Sequence |
32- CUCAAGCAGCACUAAGACUUUU -54
Get sequence
|