MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7262-P3

Family name MIR-7262 (all species)
Seed UCAAGCA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7262-P1  Sha-Mir-7262-P2  Sha-Mir-7262-P4  Sha-Mir-7262-P5  Sha-Mir-7262-P6  Sha-Mir-7262-P7 
Orthologues Mdo-Mir-7262-P3 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL861705.1: 2852365-2852418 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUUGGUGUUCCUGAGUGCAGGUGUCCCAAAAGUCUCAGUGCAGCUGGAAGUUUUUAUCCGCCUCAAGCAGCACUAAGACUUUUGGGACACUCUGUCGAAUCCAUUCUUGAUGA
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Structure
        10         20         30        40        50      
GAUUGGUGUUCCUGAGU-    -|              C     A   G  A  UUU 
                  GCAG GUGUCCCAAAAGUCU AGUGC GCU GA GU   U
                  UGUC CACAGGGUUUUCAGA UCACG CGA CU CG   A
AGUAGUUCUUACCUAAGC    U^              A     A   A  C  CCU 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7262-P3_5p*

mirBase accessionNone
Sequence
0- AAGUCUCAGUGCAGCUGGAAGU -22
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Mature sequence

Sha-Mir-7262-P3_3p

mirBase accessionNone
Sequence
32- CUCAAGCAGCACUAAGACUUUU -54
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