MirGeneDB ID | Sha-Mir-7262-P7 |
Family name |
MIR-7262 (all species) |
Seed |
AACUGCU |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
|
Paralogues |
Sha-Mir-7262-P1
Sha-Mir-7262-P2
Sha-Mir-7262-P3
Sha-Mir-7262-P4
Sha-Mir-7262-P5
Sha-Mir-7262-P6
|
Orthologues |
Mdo-Mir-7262-P7
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL864869.1: 2173450-2173508 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCACAGUCAUUUUUUGAAUGCAGGGUGUCUCAAAAGUUUUAGUGUAGUUUUAAGUUUAUUAAAGCUUAAACUGCUCUAAGACCUUUGGGACACUCUGUAUACUCCCUCCAUCCCAACAU
Get precursor sequence
|
Structure | 10 20 30 40 50
CCACAGUCAUUUUUUGA--| A U UAAGUUUA
AUGCAGGGUGUCUCAAA GUUUUAG GUAGUUU \
UAUGUCUCACAGGGUUU CAGAAUC CGUCAAA U
UACAACCCUACCUCCCUCA^ C U UUCGAAAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Sha-Mir-7262-P7_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CAAAAGUUUUAGUGUAGUUUUA -22
Get sequence
|
Mature sequence |
Sha-Mir-7262-P7_3p |
mirBase accession | None |
Sequence |
37- AAACUGCUCUAAGACCUUUGGG -59
Get sequence
|