MirGeneDB ID | Sha-Mir-7262-P6 |
Family name |
MIR-7262 (all species) |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
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Paralogues |
Sha-Mir-7262-P1
Sha-Mir-7262-P2
Sha-Mir-7262-P3
Sha-Mir-7262-P4
Sha-Mir-7262-P5
Sha-Mir-7262-P7
|
Orthologues |
Mdo-Mir-7262-P6
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL861558.1: 240943-240997 [-]
UCSC
Ensembl
|
Seed |
AAAACCG |
Precursor (pre-Mir +30nt flank) |
AGGGCAAAGUCUUAUAUACAGGAUGUCCCAAAAGUCUUAAUGCAGGUUUAAGGUUUUAAAGUUUAAAACCGCACUAAGACUUUUGGAAUACCUUGUAUUUGAAAUGUUAAUAUAA
Get precursor sequence
|
Structure | 10 20 30 40 50
AGGGCAAAGUCUUAUAU--| A C A A A UUU
ACAGG UGU CCAAAAGUCUUA UGC GGUUU AGG U
UGUUC AUA GGUUUUCAGAAU ACG CCAAA UUU A
AAUAUAAUUGUAAAGUUUA^ C A C - A GAA
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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Star sequence |
Sha-Mir-7262-P6_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AAAGUCUUAAUGCAGGUUUAAGG -23
Get sequence
|
Mature sequence |
Sha-Mir-7262-P6_3p (predicted) |
mirBase accession | None |
Sequence |
33- UAAAACCGCACUAAGACUUUUG -55
Get sequence
|