| MirGeneDB ID | Sha-Mir-7262-P1 |
|---|
| Family name |
MIR-7262 (all species) |
|---|
| Seed |
ACAACGG |
|---|
| Species |
Tasmanian devil (Sarcophilus harrisii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Sha-Mir-7262-P2
Sha-Mir-7262-P3
Sha-Mir-7262-P4
Sha-Mir-7262-P5
Sha-Mir-7262-P6
Sha-Mir-7262-P7
|
|---|
| Orthologues |
Mdo-Mir-7262-P1
|
|---|
| Node of Origin (locus) |
S. harrisii
|
|---|
| Node of Origin (family) |
Marsupialia
|
|---|
Genome context
(DEVIL_add) |
GL856796.1: 2798132-2798186 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCAGCUCUGCCUAAUGCAAGGGGUGUCCCAAAAGUUUUAUUGCAGUUUUAAGCUUUAGAAACUUACAACGGCAGUAAGACUUUUAGGAAGCCCUGGAUAUACAACGUUCCACUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCAGCUCUGCCUAAUGCAA--| G C A U CUUU
GGGGU UCC AAAAGUUUUAUUGC GUU UAAG \
UCCCG AGG UUUUCAGAAUGACG CAA AUUC A
UUUCACCUUGCAACAUAUAGG^ A A G C AAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
| |
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Sha-Mir-7262-P1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAAGUUUUAUUGCAGUUUUAAG -22
Get sequence
|
|---|
| Mature sequence |
Sha-Mir-7262-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
33- UACAACGGCAGUAAGACUUUUA -55
Get sequence
|
|---|
