MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7262-P1

Family name MIR-7262 (all species)
Seed ACAACGG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7262-P2  Sha-Mir-7262-P3  Sha-Mir-7262-P4  Sha-Mir-7262-P5  Sha-Mir-7262-P6  Sha-Mir-7262-P7 
Orthologues Mdo-Mir-7262-P1 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL856796.1: 2798132-2798186 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCUCUGCCUAAUGCAAGGGGUGUCCCAAAAGUUUUAUUGCAGUUUUAAGCUUUAGAAACUUACAACGGCAGUAAGACUUUUAGGAAGCCCUGGAUAUACAACGUUCCACUUU
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Structure
        10          20        30        40        50       
GCAGCUCUGCCUAAUGCAA--|    G   C              A   U    CUUU 
                     GGGGU UCC AAAAGUUUUAUUGC GUU UAAG    \
                     UCCCG AGG UUUUCAGAAUGACG CAA AUUC    A
UUUCACCUUGCAACAUAUAGG^    A   A              G   C    AAAG 
   110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7262-P1_5p*

mirBase accessionNone
Sequence
0- AAAGUUUUAUUGCAGUUUUAAG -22
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Mature sequence

Sha-Mir-7262-P1_3p

mirBase accessionNone
Sequence
33- UACAACGGCAGUAAGACUUUUA -55
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