MirGeneDB ID | Mdo-Mir-7262-P1 |
Family name |
MIR-7262 (all species) |
Seed |
ACAACGG |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7262a
|
Paralogues |
Mdo-Mir-7262-P2
Mdo-Mir-7262-P3
Mdo-Mir-7262-P4
Mdo-Mir-7262-P5
Mdo-Mir-7262-P6
Mdo-Mir-7262-P7
|
Orthologues |
Sha-Mir-7262-P1
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
2: 142994546-142994600 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAACUGUGCCUAGCAACGCAGGGUGUCCCAAAAGUUUUAUUGCAGUUUUAAGCUUUAGAAACUUACAACGGCAGUAAGACUUUUAGGAAGCCCUGUAUAUGCACCUUCCUGAGUC
Get precursor sequence
|
Structure | 10 20 30 40 50
CAACUGUGCCUAGCAAC--| G C A U CUUU
GCAGGGU UCC AAAAGUUUUAUUGC GUU UAAG \
UGUCCCG AGG UUUUCAGAAUGACG CAA AUUC A
CUGAGUCCUUCCACGUAUA^ A A G C AAAG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7262-P1_5p* (predicted) |
mirBase accession | MIMAT0028490 |
Sequence |
0- AAAGUUUUAUUGCAGUUUUAAG -22
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7262a-5p
|
Mature sequence |
Mdo-Mir-7262-P1_3p |
mirBase accession | MIMAT0028491 |
Sequence |
33- UACAACGGCAGUAAGACUUUUA -55
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7262a-3p
|