MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7262-P1

Family name MIR-7262 (all species)
Seed ACAACGG
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7262a
Paralogues Mdo-Mir-7262-P2  Mdo-Mir-7262-P3  Mdo-Mir-7262-P4  Mdo-Mir-7262-P5  Mdo-Mir-7262-P6  Mdo-Mir-7262-P7 
Orthologues Sha-Mir-7262-P1 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
2: 142994546-142994600 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAACUGUGCCUAGCAACGCAGGGUGUCCCAAAAGUUUUAUUGCAGUUUUAAGCUUUAGAAACUUACAACGGCAGUAAGACUUUUAGGAAGCCCUGUAUAUGCACCUUCCUGAGUC
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Structure
        10          20        30        40        50       
CAACUGUGCCUAGCAAC--|      G   C              A   U    CUUU 
                   GCAGGGU UCC AAAAGUUUUAUUGC GUU UAAG    \
                   UGUCCCG AGG UUUUCAGAAUGACG CAA AUUC    A
CUGAGUCCUUCCACGUAUA^      A   A              G   C    AAAG 
   110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7262-P1_5p* (predicted)

mirBase accessionMIMAT0028490
Sequence
0- AAAGUUUUAUUGCAGUUUUAAG -22
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Proposed targets TargetScanVert: mdo-miR-7262a-5p
Mature sequence

Mdo-Mir-7262-P1_3p

mirBase accessionMIMAT0028491
Sequence
33- UACAACGGCAGUAAGACUUUUA -55
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Proposed targets TargetScanVert: mdo-miR-7262a-3p