MirGeneDB ID | Mdo-Mir-7262-P5 |
Family name |
MIR-7262 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
|
Paralogues |
Mdo-Mir-7262-P1
Mdo-Mir-7262-P2
Mdo-Mir-7262-P3
Mdo-Mir-7262-P4
Mdo-Mir-7262-P6
Mdo-Mir-7262-P7
|
Orthologues |
Sha-Mir-7262-P5
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
4: 320770574-320770632 [+]
UCSC
Ensembl
|
Seed |
AACUGCU |
Precursor (pre-Mir +30nt flank) |
CACACACACACACACACUCUUACAAUAUCUCAAAAGACUUGAAGCAAUUUUAAGCUAUUAAAGCUUAAAACUGCUUUAAGACUUUUAGGAUAUCUUCUUUAUCACUAUAUGUAAAUAUG
Get precursor sequence
|
Structure | 10 20 30 40 50
CACACACACACACACACUCUUACA--| UC A A AGCUAU
AUAUC AAAAG CUUGAAGCA UUUUA \
UAUAG UUUUC GAAUUUCGU AAAAU U
GUAUAAAUGUAUAUCACUAUUUCUUC^ GA A C UCGAAA
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7262-P5_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CAAAAGACUUGAAGCAAUUUUA -22
Get sequence
|
Mature sequence |
Mdo-Mir-7262-P5_3p (predicted) |
mirBase accession | None |
Sequence |
37- AAACUGCUUUAAGACUUUUAGG -59
Get sequence
|