MirGeneDB ID | Mdo-Mir-7262-P4 |
Family name |
MIR-7262 (all species) |
Seed |
AACUGUG |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7262f
|
Paralogues |
Mdo-Mir-7262-P1
Mdo-Mir-7262-P2
Mdo-Mir-7262-P3
Mdo-Mir-7262-P5
Mdo-Mir-7262-P6
Mdo-Mir-7262-P7
|
Orthologues |
Sha-Mir-7262-P4
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
X: 18001896-18001954 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAAAACAGAGAUCAAAAAUCCAGGGUGUCUCAAAAGACUUAGUGCAGUUUUAAAACAUUAAAUAUUAAAACUGUGCAAAGGCUUUUGGGCCAACCUGUAUCAUAUUCUCCGUGACCACA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAAAACAGAGAUCAAAAAUC--| G U A A UG AAACAU
CAGG UG CUCAAAAG CUU G CAGUUUUA \
GUCC AC GGGUUUUC GAA C GUCAAAAU U
ACACCAGUGCCUCUUAUACUAU^ A C G A GU UAUAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7262-P4_5p* |
mirBase accession | MIMAT0050399 |
Sequence |
0- CAAAAGACUUAGUGCAGUUUUA -22
Get sequence
|
Mature sequence |
Mdo-Mir-7262-P4_3p |
mirBase accession | MIMAT0050400 |
Sequence |
37- AAACUGUGCAAAGGCUUUUGGG -59
Get sequence
|