MirGeneDB ID | Mdo-Mir-7262-P6 |
Family name |
MIR-7262 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7262g
|
Paralogues |
Mdo-Mir-7262-P1
Mdo-Mir-7262-P2
Mdo-Mir-7262-P3
Mdo-Mir-7262-P4
Mdo-Mir-7262-P5
Mdo-Mir-7262-P7
|
Orthologues |
Sha-Mir-7262-P6
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
4: 190697491-190697546 [-]
UCSC
Ensembl
|
Seed |
AAAACGG |
Precursor (pre-Mir +30nt flank) |
CGAGGUGUUGGCAUGAUGCAGAGUGUCCCCAAAGUCUUACUGCAGUUUGAGGUUUAUUAAAGCUUAAAACGGCACUAAGACUUUUGGGACAACUCUGUGUGACUACGAAAAUCAGU
Get precursor sequence
|
Structure | 10 20 30 40 50
CGAGGUGUUGGCAUGAU- -| C C A G UUUA
GCAGAG UGUCCC AAAGUCUUA UGC GUUU AGG U
UGUCUC ACAGGG UUUCAGAAU ACG CAAA UUC U
UGACUAAAAGCAUCAGUG A^ U C G A GAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7262-P6_5p* |
mirBase accession | MIMAT0050244 |
Sequence |
0- AAAGUCUUACUGCAGUUUGAGG -22
Get sequence
|
Mature sequence |
Mdo-Mir-7262-P6_3p |
mirBase accession | MIMAT0050245 |
Sequence |
34- UAAAACGGCACUAAGACUUUUG -56
Get sequence
|