MirGeneDB ID | Mdo-Mir-7262-P2 |
Family name |
MIR-7262 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7262b
|
Paralogues |
Mdo-Mir-7262-P1
Mdo-Mir-7262-P3
Mdo-Mir-7262-P4
Mdo-Mir-7262-P5
Mdo-Mir-7262-P6
Mdo-Mir-7262-P7
|
Orthologues |
Neu-Mir-7262-P2
Sha-Mir-7262-P2
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
2: 44490335-44490394 [-]
UCSC
Ensembl
|
Seed |
AACUGGA |
Precursor (pre-Mir +30nt flank) |
CGUUUGCGGCGCCUCUUAUAUAGGGUGUCCCAAAAGUCUAAGUGCAGUUUUAAGAUUAUCAAAGCCUAAAACUGGACCAAGGCUUUUGGGACAACCUAUAUGUUUCCGUUGUACUGACUC
Get precursor sequence
|
Structure | 10 20 30 40 50
CGUUUGCGGCGCCUCUU--| G AA G AGAUUA
AUAUAGG UGUCCCAAAAGUCU GU CAGUUUUA U
UAUAUCC ACAGGGUUUUCGGA CA GUCAAAAU C
CUCAGUCAUGUUGCCUUUG^ A AC G CCGAAA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7262-P2_5p* |
mirBase accession | MIMAT0028544 |
Sequence |
0- CAAAAGUCUAAGUGCAGUUUUA -22
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7262b-5p
|
Mature sequence |
Mdo-Mir-7262-P2_3p |
mirBase accession | MIMAT0028545 |
Sequence |
38- AAACUGGACCAAGGCUUUUGGG -60
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7262b-3p
|