MirGeneDB ID | Mdo-Mir-7262-P7 |
Family name |
MIR-7262 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7262l
|
Paralogues |
Mdo-Mir-7262-P1
Mdo-Mir-7262-P2
Mdo-Mir-7262-P3
Mdo-Mir-7262-P4
Mdo-Mir-7262-P5
Mdo-Mir-7262-P6
|
Orthologues |
Neu-Mir-7262-P7
Sha-Mir-7262-P7
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
|
Genome context (monDom5_add) |
5: 223280789-223280847 [-]
UCSC
Ensembl
|
Seed |
AACUGCU |
Precursor (pre-Mir +30nt flank) |
GCCACAGUCAUUGCUGAAUGCAGGGUGUCUCAAAAGUUUUAGUGUAGUUUUAAGUUUAUUAAAGCUUAAACUGCUCUAAGACCUUUGGGACACUCUGUAUACUCCCUCCACCCCAACCU
Get precursor sequence
|
Structure | 10 20 30 40 50
GCCACAGUCAUUGCUGA--| A U UAAGUUUA
AUGCAGGGUGUCUCAAA GUUUUAG GUAGUUU \
UAUGUCUCACAGGGUUU CAGAAUC CGUCAAA U
UCCAACCCCACCUCCCUCA^ C U UUCGAAAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mdo-Mir-7262-P7_5p* |
mirBase accession | MIMAT0050292 |
Sequence |
0- CAAAAGUUUUAGUGUAGUUUUA -22
Get sequence
|
Mature sequence |
Mdo-Mir-7262-P7_3p |
mirBase accession | MIMAT0050293 |
Sequence |
37- AAACUGCUCUAAGACCUUUGGG -59
Get sequence
|