MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7262-P7

Family name MIR-7262 (all species)
Seed AACUGCU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7262l
Paralogues Mdo-Mir-7262-P1  Mdo-Mir-7262-P2  Mdo-Mir-7262-P3  Mdo-Mir-7262-P4  Mdo-Mir-7262-P5  Mdo-Mir-7262-P6 
Orthologues Sha-Mir-7262-P7 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
5: 223280789-223280847 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCACAGUCAUUGCUGAAUGCAGGGUGUCUCAAAAGUUUUAGUGUAGUUUUAAGUUUAUUAAAGCUUAAACUGCUCUAAGACCUUUGGGACACUCUGUAUACUCCCUCCACCCCAACCU
Get precursor sequence
Structure
        10          20        30        40        50         
GCCACAGUCAUUGCUGA--|                A       U       UAAGUUUA 
                   AUGCAGGGUGUCUCAAA GUUUUAG GUAGUUU        \
                   UAUGUCUCACAGGGUUU CAGAAUC CGUCAAA        U
UCCAACCCCACCUCCCUCA^                C       U       UUCGAAAU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7262-P7_5p*

mirBase accessionMIMAT0050292
Sequence
0- CAAAAGUUUUAGUGUAGUUUUA -22
Get sequence
Mature sequence

Mdo-Mir-7262-P7_3p

mirBase accessionMIMAT0050293
Sequence
37- AAACUGCUCUAAGACCUUUGGG -59
Get sequence