MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7371-o2

Family name MIR-7371 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o18  Sha-Mir-7371-o19  Sha-Mir-7371-o20  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-o28  Sha-Mir-7371-P11d  Sha-Mir-7371-P11e  Sha-Mir-7371-P12a  Sha-Mir-7371-P12b  Sha-Mir-7371-P13  Sha-Mir-7371-P15  Sha-Mir-7371-P17  Sha-Mir-7371-P18  Sha-Mir-7371-P19-v1  Sha-Mir-7371-P20  Sha-Mir-7371-P25  Sha-Mir-7371-P28a  Sha-Mir-7371-P28b  Sha-Mir-7371-P29  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P2a  Mdo-Mir-7371-P2b 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867598.1: 1403552-1403609 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7371-o2)		 Mir-7262-P5 GL867598.1: 1359395-1359452 [-] UCSC Ensembl
Mir-7370 GL867598.1: 1366572-1366630 [-] UCSC Ensembl
Mir-7371-o1 GL867598.1: 1401798-1401859 [-] UCSC Ensembl
Mir-7371-o2 GL867598.1: 1403552-1403609 [-] UCSC Ensembl
Mir-7371-o3 GL867598.1: 1405296-1405356 [-] UCSC Ensembl
Mir-7371-o4-v1 GL867598.1: 1407246-1407303 [-] UCSC Ensembl
Mir-7371-o4-v2 GL867598.1: 1407246-1407304 [-] UCSC Ensembl
Seed AGAGCAU
Precursor
(pre-Mir +30nt flank)		 
CCUCCACUCUUCUACCAUCUCCAUUUUCUCCCUUUGUACAAGAUGUUCUGUUGUAUAAAUAGCAAAUAGAGCAUUUUGUAUGAAGGGAGUUUUUGGAGGCAUAGCAUCGACCUUAAAG
Get precursor sequence
Structure
        10          20        30        40        50        
CCUCCACUCUUCUACCA--|     UUUU       UG                GUAUA 
                   UCUCCA    CUCCCUU  UACAAGAUGUUCUGUU     A
                   GGAGGU    GAGGGAA  AUGUUUUACGAGAUAA     A
GAAAUUCCAGCUACGAUAC^     UUUU       GU                ACGAU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7371-o2_5p*
mirBase accessionNone
Sequence 
0- CCUUUGUACAAGAUGUUCUGUU -22
Get sequence
Mature sequence

Sha-Mir-7371-o2_3p
mirBase accessionNone
Sequence 
36- UAGAGCAUUUUGUAUGAAGGGA -58
Get sequence