MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-7370

Family name MIR-7370 (all species)
Seed UUCACAC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Mdo-Mir-7370 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)
GL867598.1: 1366572-1366630 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUCUUUCUUCUUUCCCUUCCAGUUGCCCCAUUCACACCAGAUGCUCCCUUUUGUGAAUUCUGUCAAAAGGGAUAUCCUGUGUGAAAGGGGUUGCUGGGACUGAAUUCCUGAGCCGGAA
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Structure
        10          20        30        40        50         
AAUCUUUCUUCUUUCCC--|      U     A       CA    C        GUGAA 
                   UUCCAGU GCCCC UUCACAC  GAUG UCCCUUUU     U
                   AGGGUCG UGGGG AAGUGUG  CUAU AGGGAAAA     U
AAGGCCGAGUCCUUAAGUC^      U     A       UC    -        CUGUC 
       110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7370_5p

mirBase accessionNone
Sequence
0- AUUCACACCAGAUGCUCCCUUUU -23
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Star sequence

Sha-Mir-7370_3p*

mirBase accessionNone
Sequence
37- AAGGGAUAUCCUGUGUGAAAGG -59
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