MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7370

Family name MIR-7370 (all species)
Seed AGGGAUA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7370
Paralogues
Orthologues Sha-Mir-7370 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)
X: 38866830-38866888 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-7370)
Mir-7370 X: 38866830-38866888 [-] UCSC Ensembl
Mir-7371-P1 X: 38895437-38895494 [-] UCSC Ensembl
Mir-7371-P2a X: 38896648-38896704 [-] UCSC Ensembl
Mir-7371-P3 X: 38897274-38897334 [-] UCSC Ensembl
Mir-7371-P4 X: 38897921-38897979 [-] UCSC Ensembl
Mir-7371-P5 X: 38898553-38898610 [-] UCSC Ensembl
Mir-7371-P6 X: 38899297-38899358 [-] UCSC Ensembl
Mir-7371-P7 X: 38901020-38901081 [-] UCSC Ensembl
Mir-7371-P8-v1 X: 38901553-38901612 [-] UCSC Ensembl
Mir-7371-P8-v2 X: 38901553-38901612 [-] UCSC Ensembl
Mir-7371-P2b X: 38902124-38902180 [-] UCSC Ensembl
Mir-7371-P9 X: 38902981-38903043 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCUUUCUUCGAUCCCUUCCAGUUGCUCCUUUCACACCAGAUGCUCCCUUUUGUGAAUUCUGUAAAAAGGGAUAUCCUGUGUGAAAGGAGUUGCUAGGGCCAAAUCCCUCGGCAGGAA
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Structure
        10         20         30        40        50         
UAUCUUUCUUCGAUCCCU-   -|  U             CA    C        GUGAA 
                   UCC AGU GCUCCUUUCACAC  GAUG UCCCUUUU     U
                   GGG UCG UGAGGAAAGUGUG  CUAU AGGGAAAA     U
AAGGACGGCUCCCUAAACC   A^  U             UC    -        AUGUC 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7370_5p*

mirBase accessionMIMAT0028762
Sequence
0- UUUCACACCAGAUGCUCCCUUUU -23
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Proposed targets TargetScanVert: mdo-miR-7370-5p
Mature sequence

Mdo-Mir-7370_3p

mirBase accessionMIMAT0028763
Sequence
37- AAGGGAUAUCCUGUGUGAAAGG -59
Get sequence
Proposed targets TargetScanVert: mdo-miR-7370-3p