MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-33

Family name MIR-33 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-33  Aca-Mir-33-P1  Aca-Mir-33-P3  Aga-Mir-33  Ami-Mir-33-P1  Ami-Mir-33-P3  Ava-Mir-33  Bfl-Mir-33-P6  Bfl-Mir-33-P7  Bge-Mir-33  Bla-Mir-33-P6  Bla-Mir-33-P7  Bta-Mir-33-P1  Bta-Mir-33-P3  Cfa-Mir-33-P1  Cfa-Mir-33-P3  Cin-Mir-33  Cja-Mir-33-P1  Cja-Mir-33-P3  Cli-Mir-33-P1  Cli-Mir-33-P3  Cmi-Mir-33-P1  Cmi-Mir-33-P3  Cpi-Mir-33-P1  Cpi-Mir-33-P3  Cpo-Mir-33-P1  Cpo-Mir-33-P3  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dgr-Mir-33  Dlo-Mir-33  Dma-Mir-33  Dme-Mir-33  Dmo-Mir-33  Dno-Mir-33-P1  Dno-Mir-33-P3  Dpu-Mir-33  Dre-Mir-33-P1a  Dsi-Mir-33  Dya-Mir-33  Eba-Mir-33  Ebu-Mir-33  Eca-Mir-33-P1  Eca-Mir-33-P3  Efe-Mir-33  Egr-Mir-33  Esc-Mir-33  Ete-Mir-33-P1  Ete-Mir-33-P3  Gga-Mir-33-P1  Gga-Mir-33-P3  Gja-Mir-33-P1  Gja-Mir-33-P3  Gmo-Mir-33-P1a  Gmo-Mir-33-P1b  Gsp-Mir-33  Hme-Mir-33-P8  Hme-Mir-33-P9  Hru-Mir-33  Hsa-Mir-33-P1  Hsa-Mir-33-P3  Isc-Mir-33  Laf-Mir-33-P1  Laf-Mir-33-P3  Lan-Mir-33-P10  Lan-Mir-33-P11  Lch-Mir-33-P1  Lch-Mir-33-P3  Lgi-Mir-33  Llo-Mir-33  Loc-Mir-33-P1  Loc-Mir-33-P3  Lpo-Mir-33-P12  Lpo-Mir-33-P13  Lpo-Mir-33-P14  Mal-Mir-33-P1a  Mal-Mir-33-P1b  Mal-Mir-33-P3  Mdo-Mir-33-P3  Mgi-Mir-33  Mml-Mir-33-P1  Mml-Mir-33-P3  Mmr-Mir-33-P1  Mmr-Mir-33-P3  Mmu-Mir-33-P3  Mom-Mir-33  Mun-Mir-33-P1  Mun-Mir-33-P3  Neu-Mir-33-P3  Npo-Mir-33  Oan-Mir-33-P1  Oan-Mir-33-P3  Obi-Mir-33  Ocu-Mir-33-P1  Ocu-Mir-33-P3  Ofu-Mir-33  Ovu-Mir-33  Pab-Mir-33-P1  Pab-Mir-33-P3  Pau-Mir-33  Pbv-Mir-33-P1  Pbv-Mir-33-P3  Pca-Mir-33  Pcr-Mir-33  Pdu-Mir-33  Pfl-Mir-33  Pma-Mir-33-o1  Pma-Mir-33-o2  Pma-Mir-33-o3  Pmi-Mir-33  Pve-Mir-33-P17a  Pve-Mir-33-P17b  Rno-Mir-33-P3  Rph-Mir-33-P15  Rph-Mir-33-P16  Sha-Mir-33-P3  Sko-Mir-33  Snu-Mir-33  Spt-Mir-33-P1  Spt-Mir-33-P3  Spu-Mir-33  Sto-Mir-33-P1  Sto-Mir-33-P3  Tca-Mir-33  Tgu-Mir-33-P1  Tgu-Mir-33-P3  Tni-Mir-33-P1a  Tni-Mir-33-P1b  Tni-Mir-33-P3  War-Mir-33  Xbo-Mir-33  Xla-Mir-33-P1c  Xla-Mir-33-P1d  Xla-Mir-33-P3a  Xla-Mir-33-P3b  Xtr-Mir-33-P1  Xtr-Mir-33-P3 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GpalI1)		 Scaffold27: 1646314-1646379 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-33)		 Mir-33 Scaffold27: 1646314-1646379 [+] Ensembl
Mir-9-P10 Scaffold27: 1664994-1665054 [-] Ensembl
Seed UGCAUUG
Precursor
(pre-Mir +30nt flank)		 
UUUCUUUCUGGACCAGAUAUAAUUACAAAGGUGCAUUGUAGUCGCAUUGUCCGUGUUAUAAGGAAGAAGUCGGCCAAUACUUCUGCAAUGCAAACUUUGUUAAUAUCAAAAAUCAACCAUUCAUAG
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Structure
        10        20          30         40        50        60  
UUUCUUUCUGGACCAGAUAUA-   -      G-|         UCGC    U CGUGUUAUAA 
                      AUU ACAAAG  UGCAUUGUAG    AUUG C          \
                      UAA UGUUUC  ACGUAACGUC    UAAC G          G
GAUACUUACCAACUAAAAACUA   U      AA^         UUCA    C GCUGAAGAAG 
    120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To To To To To To To To To To To To To To To To To To To To To
Mature sequence

Gpa-Mir-33_5p
mirBase accessionNone
Sequence 
0- GUGCAUUGUAGUCGCAUUGUC -21
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Star sequence

Gpa-Mir-33_3p*
mirBase accessionNone
Sequence 
44- CAAUACUUCUGCAAUGCAAACU -66
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