MirGeneDB ID | Mml-Mir-33-P1 |
Family name |
MIR-33 (all species) |
Seed |
AGUGCCU |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-33b
|
Paralogues |
Mml-Mir-33-P3
|
Orthologues |
Aae-Mir-33
Aca-Mir-33-P1
Ami-Mir-33-P1
Bge-Mir-33
Bta-Mir-33-P1
Cfa-Mir-33-P1
Cgi-Mir-33
Cin-Mir-33
Cli-Mir-33-P1
Cmi-Mir-33-P1
Cpi-Mir-33-P1
Cpo-Mir-33-P1
Csc-Mir-33
Cte-Mir-33
Dan-Mir-33
Dma-Mir-33
Dme-Mir-33
Dmo-Mir-33
Dno-Mir-33-P1
Dpu-Mir-33
Dre-Mir-33-P1a
Dsi-Mir-33
Dya-Mir-33
Ebu-Mir-33
Efe-Mir-33
Esc-Mir-33
Ete-Mir-33-P1
Gga-Mir-33-P1
Gja-Mir-33-P1
Gmo-Mir-33-P1a
Gmo-Mir-33-P1b
Hsa-Mir-33-P1
Isc-Mir-33
Lch-Mir-33-P1
Lgi-Mir-33
Loc-Mir-33-P1
Mal-Mir-33-P1a
Mal-Mir-33-P1b
Mun-Mir-33-P1
Npo-Mir-33
Oan-Mir-33-P1
Obi-Mir-33
Ocu-Mir-33-P1
Ovu-Mir-33
Pbv-Mir-33-P1
Pfl-Mir-33
Pma-Mir-33-o1
Pmi-Mir-33
Sko-Mir-33
Spt-Mir-33-P1
Spu-Mir-33
Sto-Mir-33-P1
Tca-Mir-33
Tgu-Mir-33-P1
Tni-Mir-33-P1a
Tni-Mir-33-P1b
Xbo-Mir-33
Xla-Mir-33-P1c
Xla-Mir-33-P1d
Xtr-Mir-33-P1
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (rheMac8_trace) |
chr16: 17953800-17953858 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGGGGGCCAAGAGAGGCGGGCGGCCCCGCGGUGCAUUGCUGUUGCAUUGCACGUGUGUGAGGCGGGUGCAGUGCCUCGGCAGUGCAGCCCGGAGCCGGCCCCUGGCACCGCGGGCCCCC
Get precursor sequence
|
Structure | 10 20 30 40 50
UGGGGGCCAAGAGAGGC- -| C C - UU CGUGUGU
GGG CGGC CCG GG UGCAUUGCUG GCAUUGCA \
CCC GCCG GGC CC ACGUGACGGC CGUGACGU G
CCCCCGGGCGCCACGGUC G^ A - G UC GGGCGGA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-33-P1_5p* |
mirBase accession | MIMAT0006173 |
Sequence |
0- GUGCAUUGCUGUUGCAUUGCA -21
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-33b-5p
|
Mature sequence |
Mml-Mir-33-P1_3p |
mirBase accession | MIMAT0026808 |
Sequence |
38- CAGUGCCUCGGCAGUGCAGCC -59
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-33b-3p
|