| MirGeneDB ID | Pve-Mir-33-P17a |
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| Family name |
MIR-33 (all species) |
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| Species |
Vernerds tusk shell (Pictodentalium vernedei) |
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| MiRBase ID |
|
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| Paralogues |
Pve-Mir-33-P17b
|
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| Orthologues |
Aae-Mir-33
Aga-Mir-33
Ava-Mir-33
Bge-Mir-33
Cin-Mir-33
Csc-Mir-33
Cte-Mir-33
Dan-Mir-33
Dgr-Mir-33
Dlo-Mir-33
Dma-Mir-33
Dme-Mir-33
Dmo-Mir-33
Dpu-Mir-33
Dsi-Mir-33
Dya-Mir-33
Eba-Mir-33
Ebu-Mir-33
Efe-Mir-33
Egr-Mir-33
Esc-Mir-33
Gpa-Mir-33
Gsp-Mir-33
Hru-Mir-33
Isc-Mir-33
Lgi-Mir-33
Llo-Mir-33
Mgi-Mir-33
Mom-Mir-33
Npo-Mir-33
Obi-Mir-33
Ofu-Mir-33
Ovu-Mir-33
Pau-Mir-33
Pca-Mir-33
Pcr-Mir-33
Pdu-Mir-33
Pfl-Mir-33
Pmi-Mir-33
Sko-Mir-33
Snu-Mir-33
Spu-Mir-33
Tca-Mir-33
War-Mir-33
Xbo-Mir-33
|
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| Node of Origin (locus) |
Dentaliidae
|
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| Node of Origin (family) |
Bilateria
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Genome context
(Pve_genome_chr_only) |
Pve_Chr10: 10269490-10269548 [-]
Ensembl
|
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| Seed |
UGCAUUG |
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Precursor
(pre-Mir +30nt flank) |
AGGAGUAAGGUGACCGUGGCUGUAACAAUGGUGCAUUGUAGUUGCAUUGCAUUAGCAAUAAAUUAUGCAAUGCAUCUGCAGUGUAAUCAUUGAUUCAGUACCAAGCAGCAAGUUAUACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGGAGUAAGGUGACCGUG-- UAA -| U UUAGCA
GCUG CAAUGG UGCAUUGUAG UGCAUUGCA A
UGAC GUUACU AUGUGACGUC ACGUAACGU U
ACAUAUUGAACGACGAACCA UUA A^ U AUUAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | The 3p arm appears to be monoadenylated. |
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pve-Mir-33-P17a_5p |
| mirBase accession | None |
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| Sequence |
0- GUGCAUUGUAGUUGCAUUGCA -21
Get sequence
|
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| Star sequence |
Pve-Mir-33-P17a_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CAAUGCAUCUGCAGUGUAAUCA -59
Get sequence
|
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