MirGeneDB 2.1
MirGeneDB ID

Bfl-Mir-33-P7

Family name MIR-33 (all species)
Seed UGCAUUG
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-33-1
Paralogues Bfl-Mir-33-P6 
Orthologues Aae-Mir-33  Bge-Mir-33  Bla-Mir-33-P7  Cgi-Mir-33  Cin-Mir-33  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dma-Mir-33  Dme-Mir-33  Dmo-Mir-33  Dpu-Mir-33  Dsi-Mir-33  Dya-Mir-33  Ebu-Mir-33  Efe-Mir-33  Esc-Mir-33  Isc-Mir-33  Lgi-Mir-33  Npo-Mir-33  Obi-Mir-33  Ovu-Mir-33  Pfl-Mir-33  Pmi-Mir-33  Sko-Mir-33  Spu-Mir-33  Tca-Mir-33  Xbo-Mir-33 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049985.1: 3903955-3904013 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-33-P7)		 Mir-33-P7 NC_049985.1: 3903955-3904013 [-] UCSC
Mir-33-P6 NC_049985.1: 3904364-3904422 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCAGUGCACAUCGCCUUUUCUGUGGCUGAGGUGCAUUGUAGUUGCAUUGCAUGUGCACAAAGGAAGUGCAAUGUAACAGCAGUGCAGCUCAGACAUGGUUGCAAUGCAAGGACAAUGCA
Get precursor sequence
Structure
        10          20        30        40        50         
GCAGUGCACAUCGCCUUUU--|    G     G        A           UGUGCAC 
                     CUGUG CUGAG UGCAUUGU GUUGCAUUGCA       \
                     GGUAC GACUC ACGUGACG CAAUGUAACGU       A
ACGUAACAGGAACGUAACGUU^    A     G        A           GAAGGAA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Bfl-Mir-33-P7_5p
mirBase accessionMIMAT0009474
Sequence 
0- GUGCAUUGUAGUUGCAUUGCA -21
Get sequence
Co-mature sequence

Bfl-Mir-33-P7_3p
mirBase accessionNone
Sequence 
38- CAAUGUAACAGCAGUGCAGCU -59
Get sequence