MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-33-P3

Family name MIR-33 (all species)
Seed AAUGUUC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Aae-Mir-33  Aca-Mir-33-P3  Ami-Mir-33-P3  Bge-Mir-33  Bta-Mir-33-P3  Cfa-Mir-33-P3  Cgi-Mir-33  Cin-Mir-33  Cli-Mir-33-P3  Cmi-Mir-33-P3  Cpi-Mir-33-P3  Cpo-Mir-33-P3  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dma-Mir-33  Dme-Mir-33  Dmo-Mir-33  Dno-Mir-33-P3  Dpu-Mir-33  Dsi-Mir-33  Dya-Mir-33  Ebu-Mir-33  Efe-Mir-33  Esc-Mir-33  Ete-Mir-33-P3  Gga-Mir-33-P3  Gja-Mir-33-P3  Hsa-Mir-33-P3  Isc-Mir-33  Lch-Mir-33-P3  Lgi-Mir-33  Loc-Mir-33-P3  Mal-Mir-33-P3  Mdo-Mir-33-P3  Mml-Mir-33-P3  Mmu-Mir-33-P3  Mun-Mir-33-P3  Npo-Mir-33  Oan-Mir-33-P3  Obi-Mir-33  Ocu-Mir-33-P3  Ovu-Mir-33  Pbv-Mir-33-P3  Pfl-Mir-33  Pma-Mir-33-o3  Pmi-Mir-33  Rno-Mir-33-P3  Sko-Mir-33  Spt-Mir-33-P3  Spu-Mir-33  Sto-Mir-33-P3  Tca-Mir-33  Tgu-Mir-33-P3  Tni-Mir-33-P3  Xbo-Mir-33  Xla-Mir-33-P3a  Xla-Mir-33-P3b  Xtr-Mir-33-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(DEVIL_add)		 GL861723.1: 907945-908003 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGGCAGAGCUCCCCUGCGAGCGGCUGUGGUGCAUUGUAGUUGCAUUGCACGUCAUGUCGGGCUGUGCAAUGUUCCCACAGUGCAUCCCAGAGGCCCGCGCUGCUGCCGCUGCCGCCA
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Structure
        10          20        30        40        50         
GUGGGCAGAGCUCCCCU--|  A  GG   U          AGUU        CGUCAUG 
                   GCG GC  CUG GGUGCAUUGU    GCAUUGCA       \
                   CGC CG  GAC CUACGUGACA    UGUAACGU       U
ACCGCCGUCGCCGUCGUCG^  C  GA   C          CCCU        GUCGGGC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-33-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCAUUGUAGUUGCAUUGCA -21
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Mature sequence

Sha-Mir-33-P3_3p
mirBase accessionNone
Sequence 
38- CAAUGUUCCCACAGUGCAUCC -59
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