MirGeneDB 3.0
95 microRNA genes with seed UCCCUUU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Ebu-Mir-204 None MIR-204 UCCCUUU None None FYBX02010610.1 177929 177986 - Vertebrata Vertebrata No 1
Pma-Mir-204 pma-mir-204 MIR-204 UCCCUUU MIMAT0019515 MIMAT0019516 NC_046125.1 4465635 4465692 + Vertebrata Vertebrata No 1 1
Aca-Mir-204-P1 aca-mir-204a-1 MIR-204 UCCCUUU MIMAT0021853 None GL343428.1 107556 107613 - Gnathostomata Vertebrata No 1
Ami-Mir-204-P1 ami-mir-204-2 MIR-204 UCCCUUU MIMAT0038225 MIMAT0038227 NW_017713709.1 32217618 32217675 + Gnathostomata Vertebrata No 1 1
Bta-Mir-204-P1 bta-mir-211 MIR-204 UCCCUUU MIMAT0009263 None NC_037348.1 27536525 27536582 - Gnathostomata Vertebrata No 1 1
Cfa-Mir-204-P1 cfa-mir-211 MIR-204 UCCCUUU MIMAT0009867 None chr3 37882681 37882738 + Gnathostomata Vertebrata Unknown 1 1
Cja-Mir-204-P1 None MIR-204 UCCCUUU None None CM021920.1 5221353 5221410 + Gnathostomata Vertebrata Unknown 1 1
Cli-Mir-204-P1 cli-mir-204-2 MIR-204 UCCCUUU MIMAT0038580 MIMAT0038582 scaffold506 653116 653173 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-204-P1 None MIR-204 UCCCUUU None None KI635859.1 11321625 11321682 + Gnathostomata Vertebrata Unknown 1 1
Cpi-Mir-204-P1 cpi-mir-204-2 MIR-204 UCCCUUU MIMAT0037827 None JH584488 3935478 3935535 - Gnathostomata Vertebrata No 1 1
Cpo-Mir-204-P1 cpo-mir-211 MIR-204 UCCCUUU MIMAT0047111 MIMAT0047112 scaffold_10 48990198 48990254 - Gnathostomata Vertebrata No 1
Dno-Mir-204-P1 dno-mir-211 MIR-204 UCCCUUU MIMAT0047756 MIMAT0047757 JH582005 579275 579331 - Gnathostomata Vertebrata Unknown 1 1
Eca-Mir-204-P1 eca-mir-211 MIR-204 UCCCUUU MIMAT0012901 None CM009148.1 109178768 109178825 - Gnathostomata Vertebrata No 1 1
Gga-Mir-204-P1 gga-mir-204-2 MIR-204 UCCCUUU MIMAT0001156 None 10 6140988 6141045 + Gnathostomata Vertebrata No 1 1
Gja-Mir-204-P1 None MIR-204 UCCCUUU None None NW_015171524.1 6148 6205 + Gnathostomata Vertebrata Unknown 1
Hsa-Mir-204-P1 hsa-mir-211 MIR-204 UCCCUUU MIMAT0000268 MIMAT0022694 chr15 31065059 31065116 - Gnathostomata Vertebrata No 1 1
Laf-Mir-204-P1 None MIR-204 UCCCUUU None None GL010120.1 2384900 2384957 - Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-204-P1 None MIR-204 UCCCUUU None None JH126577.1 3208970 3209027 + Gnathostomata Vertebrata Unknown 1 1
Loc-Mir-204-P1 None MIR-204 UCCCUUU None None LG3 53892358 53892415 + Gnathostomata Vertebrata Unknown 1 1
Mdo-Mir-204-P1 mdo-mir-204 MIR-204 UCCCUUU MIMAT0004127 None 1 142496661 142496718 - Gnathostomata Vertebrata No 1 1
Mml-Mir-204-P1 mml-mir-211 MIR-204 UCCCUUU MIMAT0002547 None CM014342.1 7187341 7187398 + Gnathostomata Vertebrata No 1 1
Mmr-Mir-204-P1 mmr-mir-211 MIR-204 UCCCUUU MIMAT0049148 None CM007669.1 100710163 100710220 - Gnathostomata Vertebrata Unknown 1 1
Mmu-Mir-204-P1 mmu-mir-211 MIR-204 UCCCUUU MIMAT0000668 MIMAT0017059 chr7 64205831 64205888 + Gnathostomata Vertebrata No 1 1
Mun-Mir-204-P1 None MIR-204 UCCCUUU None None LR594632.1 696390264 696390321 + Gnathostomata Vertebrata Unknown 1
Neu-Mir-204-P1 None MIR-204 UCCCUUU None None CM051813.1 150733823 150733880 + Gnathostomata Vertebrata Unknown 1 1
Oan-Mir-204-P1 oan-mir-204 MIR-204 UCCCUUU MIMAT0006841 MIMAT0006842 NC_041732.1 54081453 54081510 + Gnathostomata Vertebrata No 1 1
Ocu-Mir-204-P1 ocu-mir-211 MIR-204 UCCCUUU MIMAT0048333 MIMAT0048334 chr17 83064318 83064375 + Gnathostomata Vertebrata No 1 1
Pab-Mir-204-P1 None MIR-204 UCCCUUU None None CM054695.2 33196290 33196347 - Gnathostomata Vertebrata No 1 1
Pbv-Mir-204-P1 pbv-mir-204-2 MIR-204 UCCCUUU MIMAT0039006 None KE960308.1 31446 31503 - Gnathostomata Vertebrata Unknown
Rno-Mir-204-P1 rno-mir-211 MIR-204 UCCCUUU MIMAT0000882 MIMAT0017157 chr1 125042144 125042201 + Gnathostomata Vertebrata No 1 1
Sha-Mir-204-P1 None MIR-204 UCCCUUU None None GL834482.1 2449273 2449330 - Gnathostomata Vertebrata No 1
Spt-Mir-204-P1 None MIR-204 UCCCUUU None None QEPC01009267.1 1579709 1579766 + Gnathostomata Vertebrata Unknown 1 1
Sto-Mir-204-P1 None MIR-204 UCCCUUU None None BFAA01322934.1 406 463 + Gnathostomata Vertebrata Unknown 1 1
Tgu-Mir-204-P1 tgu-mir-204-2 MIR-204 UCCCUUU MIMAT0014570 None 10 6213146 6213203 + Gnathostomata Vertebrata Unknown 1 1
Xtr-Mir-204-P1 xtr-mir-204-1 MIR-204 UCCCUUU MIMAT0003696 None chr3 87225673 87225730 + Gnathostomata Vertebrata No 1 1
Dre-Mir-204-P1a dre-mir-204-3 MIR-204 UCCCUUU MIMAT0001279 MIMAT0048659 chr25 34590805 34590862 + Clupeocephala Vertebrata No 1 1
Gmo-Mir-204-P1a gmo-mir-204-2 MIR-204 UCCCUUU MIMAT0044029 None GeneScaffold_2132 114227 114284 - Clupeocephala Vertebrata No 1 1
Mal-Mir-204-P1a None MIR-204 UCCCUUU None None KV884906.1 917162 917218 - Clupeocephala Vertebrata No 1 1
Tni-Mir-204-P1a tni-mir-204a MIR-204 UCCCUUU MIMAT0003102 None 13 7729309 7729365 + Clupeocephala Vertebrata No 1 1
Dre-Mir-204-P1b dre-mir-204-2 MIR-204 UCCCUUU MIMAT0001279 MIMAT0031987 chr7 29337026 29337083 - Clupeocephala Vertebrata No 1
Gmo-Mir-204-P1b gmo-mir-204-1 MIR-204 UCCCUUU MIMAT0044029 None GeneScaffold_530 6574 6631 + Clupeocephala Vertebrata No 1 1
Xla-Mir-204-P1c None MIR-204 UCCCUUU None None NC_030728.1 87040550 87040607 + X. laevis Vertebrata No 1 1
Xla-Mir-204-P1d None MIR-204 UCCCUUU None None NC_030729.1 55545431 55545488 - X. laevis Vertebrata No 1 1
Aca-Mir-204-P2 aca-mir-204a-2 MIR-204 UCCCUUU MIMAT0021853 MIMAT0021854 2 48871989 48872048 + Gnathostomata Vertebrata No 1 1
Ami-Mir-204-P2 ami-mir-204-1 MIR-204 UCCCUUU MIMAT0038225 MIMAT0038226 NW_017713772.1 27629970 27630029 + Gnathostomata Vertebrata No 1 1
Bta-Mir-204-P2 bta-mir-204 MIR-204 UCCCUUU MIMAT0004338 None NC_037335.1 46962522 46962581 - Gnathostomata Vertebrata No 1 1
Cfa-Mir-204-P2 cfa-mir-204 MIR-204 UCCCUUU MIMAT0006598 None chr1 86818494 86818553 + Gnathostomata Vertebrata No 1 1
Cja-Mir-204-P2 None MIR-204 UCCCUUU None None CM021915.1 90870594 90870653 + Gnathostomata Vertebrata Unknown 1 1
Cli-Mir-204-P2 cli-mir-204-1 MIR-204 UCCCUUU MIMAT0038580 MIMAT0038581 scaffold148 920658 920717 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-204-P2 None MIR-204 UCCCUUU None None KI636021.1 267272 267331 - Gnathostomata Vertebrata Unknown 1
Cpi-Mir-204-P2 cpi-mir-204-1 MIR-204 UCCCUUU MIMAT0037827 MIMAT0037828 JH584686 8931176 8931235 + Gnathostomata Vertebrata No 1 1
Cpo-Mir-204-P2 cpo-mir-204 MIR-204 UCCCUUU MIMAT0047099 MIMAT0047100 scaffold_21 21988247 21988306 - Gnathostomata Vertebrata No 1 1
Dno-Mir-204-P2 dno-mir-204 MIR-204 UCCCUUU MIMAT0047744 MIMAT0047745 JH566042 700050 700109 + Gnathostomata Vertebrata No 1 1
Dre-Mir-204-P2 dre-mir-204-1 MIR-204 UCCCUUU MIMAT0001279 MIMAT0031924 chr5 25972085 25972142 + Gnathostomata Vertebrata No 1 1
Eca-Mir-204-P2 eca-mir-204b-2 MIR-204 UCCCUUU MIMAT0013112 None CM009170.1 19521551 19521610 + Gnathostomata Vertebrata No 1 1
Ete-Mir-204-P2 None MIR-204 UCCCUUU None None JH980371 981677 981736 - Gnathostomata Vertebrata No 1 1
Gga-Mir-204-P2 gga-mir-204-1 MIR-204 UCCCUUU MIMAT0001156 None Z 35192633 35192692 - Gnathostomata Vertebrata No 1 1
Gja-Mir-204-P2 None MIR-204 UCCCUUU None None NW_015176022.1 16453 16512 - Gnathostomata Vertebrata No 1 1
Gmo-Mir-204-P2 gmo-mir-204-3 MIR-204 UCCCUUU MIMAT0044029 None contig320882 1384 1443 + Gnathostomata Vertebrata Unknown 1 1
Hsa-Mir-204-P2 hsa-mir-204 MIR-204 UCCCUUU MIMAT0000265 MIMAT0022693 chr9 70809993 70810052 - Gnathostomata Vertebrata No 1 1
Laf-Mir-204-P2 None MIR-204 UCCCUUU None None GL010033.1 23076550 23076609 + Gnathostomata Vertebrata Unknown 1 1
Lch-Mir-204-P2 None MIR-204 UCCCUUU None None JH127310.1 529915 529974 - Gnathostomata Vertebrata Unknown 1 1
Loc-Mir-204-P2 None MIR-204 UCCCUUU None None LG2 33545292 33545351 - Gnathostomata Vertebrata No 1 1
Mal-Mir-204-P2 None MIR-204 UCCCUUU None None KV884711.1 502331 502390 + Gnathostomata Vertebrata No 1 1
Mdo-Mir-204-P2 None MIR-204 UCCCUUU None None 6 95848849 95848908 + Gnathostomata Vertebrata No 1 1
Mml-Mir-204-P2 mml-mir-204 MIR-204 UCCCUUU MIMAT0006235 MIMAT0026843 CM014350.1 86216667 86216726 - Gnathostomata Vertebrata No 1 1
Mmr-Mir-204-P2 mmr-mir-204 MIR-204 UCCCUUU MIMAT0049126 None CM007670.1 33400505 33400564 - Gnathostomata Vertebrata No 1 1
Mmu-Mir-204-P2 mmu-mir-204 MIR-204 UCCCUUU MIMAT0000237 MIMAT0017002 chr19 22750610 22750669 + Gnathostomata Vertebrata No 1 1
Mun-Mir-204-P2 None MIR-204 UCCCUUU None None LR594633.1 243787398 243787457 - Gnathostomata Vertebrata Unknown 1 1
Neu-Mir-204-P2 None MIR-204 UCCCUUU None None CM051813.1 104369612 104369671 - Gnathostomata Vertebrata No 1 1
Oan-Mir-204-P2 None MIR-204 UCCCUUU None None NC_041753.1 57858118 57858177 - Gnathostomata Vertebrata No 1 1
Ocu-Mir-204-P2 ocu-mir-204 MIR-204 UCCCUUU MIMAT0048323 MIMAT0048324 chr1 57081764 57081823 - Gnathostomata Vertebrata No 1 1
Pab-Mir-204-P2 None MIR-204 UCCCUUU None None CM054692.2 61201819 61201878 - Gnathostomata Vertebrata No 1 1
Pbv-Mir-204-P2 pbv-mir-204-1 MIR-204 UCCCUUU MIMAT0039006 MIMAT0039007 KE955677.1 99338 99397 + Gnathostomata Vertebrata Unknown 1 1
Rno-Mir-204-P2 rno-mir-204 MIR-204 UCCCUUU MIMAT0000877 MIMAT0004739 chr1 240403032 240403091 + Gnathostomata Vertebrata No 1 1
Sha-Mir-204-P2 sha-mir-204 MIR-204 UCCCUUU None MIMAT0022790 GL841514.1 388110 388169 + Gnathostomata Vertebrata No 1 1
Spt-Mir-204-P2 None MIR-204 UCCCUUU None None QEPC01009656.1 3655356 3655415 - Gnathostomata Vertebrata Unknown 1 1
Sto-Mir-204-P2 None MIR-204 UCCCUUU None None BFAA01000604.1 438648 438706 - Gnathostomata Vertebrata No 1 1
Tgu-Mir-204-P2 tgu-mir-204-1 MIR-204 UCCCUUU MIMAT0014570 None Z 12463928 12463987 - Gnathostomata Vertebrata No 1 1
Tni-Mir-204-P2 tni-mir-204b MIR-204 UCCCUUU MIMAT0002935 None 12 981062 981119 + Gnathostomata Vertebrata Unknown 1 1
Xtr-Mir-204-P2 xtr-mir-204-2 MIR-204 UCCCUUU MIMAT0003696 None chr1 117768519 117768578 - Gnathostomata Vertebrata No 1 1
Xla-Mir-204-P2a None MIR-204 UCCCUUU None None NC_030724.1 128264538 128264597 - X. laevis Vertebrata No 1 1
Xla-Mir-204-P2b None MIR-204 UCCCUUU None None NC_030725.1 105328821 105328880 - X. laevis Vertebrata No 1 1
Ami-Mir-204-P4 None MIR-204 UCCCUUU None None NW_017710448.1 1273114 1273171 - Gnathostomata Vertebrata No 1
Cli-Mir-204-P4 cli-mir-204-3 MIR-204 UCCCUUU MIMAT0038580 MIMAT0038583 scaffold194 1274466 1274522 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-204-P4 None MIR-204 UCCCUUU None None KI636146.1 13447 13505 - Gnathostomata Vertebrata No 1 1
Cpi-Mir-204-P4 cpi-mir-204-3 MIR-204 UCCCUUU MIMAT0037827 MIMAT0037829 JH584473 3350477 3350534 - Gnathostomata Vertebrata No 1 1
Gga-Mir-204-P4 gga-mir-211 MIR-204 UCCCUUU MIMAT0003368 None 28 2326325 2326382 + Gnathostomata Vertebrata No
Gja-Mir-204-P4 None MIR-204 UCCCUUU None None NW_015170928.1 396203 396260 + Gnathostomata Vertebrata No 1
Lch-Mir-204-P4 None MIR-204 UCCCUUU None None JH126742.1 936419 936476 + Gnathostomata Vertebrata Unknown 1
Mun-Mir-204-P4 None MIR-204 UCCCUUU None None LR594642.1 78508552 78508609 + Gnathostomata Vertebrata Unknown 1 1
Pbv-Mir-204-P4 pbv-mir-204-3 MIR-204 UCCCUUU MIMAT0039006 MIMAT0039008 KE956236.1 133468 133526 - Gnathostomata Vertebrata No 1
Spt-Mir-204-P4 None MIR-204 UCCCUUU None None QEPC01004913.1 2027000 2027057 - Gnathostomata Vertebrata Unknown 1
Sto-Mir-204-P4 None MIR-204 UCCCUUU None None BFAA01002899.1 48427 48482 - Gnathostomata Vertebrata Unknown 1 1
Tgu-Mir-204-P4 tgu-mir-204-3 MIR-204 UCCCUUU MIMAT0014570 None 28 4412657 4412714 + Gnathostomata Vertebrata Unknown 1 1

(red - mature/co-mature, blue - star)

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