MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-204-P2  Sto-Mir-204-P4 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dno-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1b  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1b  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01322934.1: 406-463 [+]
Precursor
(pre-Mir +30nt flank)
CACGUCAGAGAGACGCUGUGACCAGUGGGUUUCCCUUUCUCAUCCUAUGCCUGGGAAUAUUGAUAAGGCAGGGAGGAUAAAGGAUCACUCAACUGUCGAAUUCACUCCCUCCUCACCU
Get precursor sequence
Structure
        10          20         30        40        50         
CACGUCAGAGAGACGCUG--|   C   -    UUC     C  A    A     GGGAAU 
                    UGAC AGU GGGU   CCUUU UC UCCU UGCCU      \
                    GCUG UCA CUCA   GGAAA AG AGGG ACGGA      A
UCCACUCCUCCCUCACUUAA^   -   A    CUA     U  G    -     AUAGUU 
      110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-204-P1_5p
mirBase accessionNone
Sequence 
0- UUCCCUUUCUCAUCCUAUGCCU -22
Get sequence
Star sequence

Sto-Mir-204-P1_3p* (predicted)
mirBase accessionNone
Sequence 
37- GCAGGGAGGAUAAAGGAUCAC -58
Get sequence