MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-204-P1

Family name MIR-204 (all species)
Seed UCCCUUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-211
Paralogues Dno-Mir-204-P2 
Orthologues Aca-Mir-204-P1  Ami-Mir-204-P1  Bta-Mir-204-P1  Cfa-Mir-204-P1  Cli-Mir-204-P1  Cmi-Mir-204-P1  Cpi-Mir-204-P1  Cpo-Mir-204-P1  Dre-Mir-204-P1a  Dre-Mir-204-P1b  Ebu-Mir-204  Gga-Mir-204-P1  Gja-Mir-204-P1  Gmo-Mir-204-P1a  Gmo-Mir-204-P1b  Hsa-Mir-204-P1  Lch-Mir-204-P1  Loc-Mir-204-P1  Mal-Mir-204-P1b  Mdo-Mir-204-P1  Mml-Mir-204-P1  Mmu-Mir-204-P1  Mun-Mir-204-P1  Oan-Mir-204-P1  Ocu-Mir-204-P1  Pbv-Mir-204-P1  Pma-Mir-204  Rno-Mir-204-P1  Sha-Mir-204-P1  Spt-Mir-204-P1  Sto-Mir-204-P1  Tgu-Mir-204-P1  Tni-Mir-204-P1b  Xla-Mir-204-P1c  Xla-Mir-204-P1d  Xtr-Mir-204-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH582005: 579275-579331 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCACCCAGCUGGCCAUGGGACCUGUGGGCUUCCCUUUGUCAUCCUUUGCCUAGGAUCCGAGUGGGGCAGGGACAACAAAGGGGUGCUCAGGCGUCACCUCCACAACAUGCCAAGAA
Get precursor sequence
Structure
        10          20         30        40        50        
CCCACCCAGCUGGCCAU-  -   -| G     U         CA     U    AGGAU 
                  GG GAC CU UGGGC UCCCUUUGU  UCCUU GCCU     C
                  CC CUG GG ACUCG GGGGAAACA  AGGGA CGGG     C
AAGAACCGUACAACACCU  A   C^ -     U         AC     -    GUGAG 
     110       100         90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-204-P1_5p

mirBase accessionMIMAT0047756
Sequence
0- UUCCCUUUGUCAUCCUUUGCCU -22
Get sequence
Star sequence

Dno-Mir-204-P1_3p* (predicted)

mirBase accessionMIMAT0047757
Sequence
36- GCAGGGACAACAAAGGGGUGC -57
Get sequence