MirGeneDB 3.0
61 microRNA genes with seed CCUUCAU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pma-Mir-205-o1 pma-mir-205a MIR-205 CCUUCAU MIMAT0019517 MIMAT0019518 NC_046082.1 10653082 10653140 - P. marinus Vertebrata No 1
Pma-Mir-205-o2 pma-mir-205b MIR-205 CCUUCAU MIMAT0019519 None NC_046116.1 8977433 8977496 + P. marinus Vertebrata No 1
Cmi-Mir-205-P1 None MIR-205 CCUUCAU None None KI635869.1 4038642 4038703 + Gnathostomata Vertebrata No 1 1
Lch-Mir-205-P1 None MIR-205 CCUUCAU None None JH126690.1 1612973 1613031 - Gnathostomata Vertebrata Unknown 1 1
Sto-Mir-205-P1 None MIR-205 CCUUCAU None None BFAA01000934.1 396938 396999 + Gnathostomata Vertebrata No 1 1
Xtr-Mir-205-P1 xtr-mir-205b MIR-205 CCUUCAU MIMAT0003622 None chr4 125249616 125249675 - Gnathostomata Vertebrata No 1 1
Aca-Mir-205-P2 aca-mir-205b MIR-205 CCUUCAU MIMAT0021856 None 5 3605657 3605715 + Gnathostomata Vertebrata No 1
Ami-Mir-205-P2 ami-mir-205b MIR-205 CCUUCAU MIMAT0038230 None NW_017709854.1 27055204 27055262 + Gnathostomata Vertebrata Unknown 1
Cli-Mir-205-P2 None MIR-205 CCUUCAU None None scaffold121 707087 707145 + Gnathostomata Vertebrata No 1
Cmi-Mir-205-P2 None MIR-205 CCUUCAU None None KI635871.1 1799406 1799465 + Gnathostomata Vertebrata No
Cpi-Mir-205-P2 cpi-mir-205b MIR-205 CCUUCAU MIMAT0037832 None JH584592 638160 638218 + Gnathostomata Vertebrata Unknown 1
Gga-Mir-205-P2 gga-mir-205b MIR-205 CCUUCAU MIMAT0001164 None 1 1908508 1908566 - Gnathostomata Vertebrata No 1
Gja-Mir-205-P2 None MIR-205 CCUUCAU None None NW_015169313.1 47121 47180 - Gnathostomata Vertebrata Unknown
Pbv-Mir-205-P2 pbv-mir-205b MIR-205 CCUUCAU MIMAT0039010 None KE953352.1 71037 71095 - Gnathostomata Vertebrata Unknown
Spt-Mir-205-P2 None MIR-205 CCUUCAU None None QEPC01000343.1 3045689 3045747 - Gnathostomata Vertebrata Unknown 1
Sto-Mir-205-P2 None MIR-205 CCUUCAU None None BFAA01054426.1 1748 1806 - Gnathostomata Vertebrata No 1
Tgu-Mir-205-P2 tgu-mir-205 MIR-205 CCUUCAU MIMAT0014616 None Tgu-Mir-205-P2_pre_1A:622247-622389 43 101 - Gnathostomata Vertebrata Unknown 1
Aca-Mir-205-P4 aca-mir-205a MIR-205 CCUUCAU MIMAT0021855 None 4 125660749 125660807 + Gnathostomata Vertebrata No
Ami-Mir-205-P4 ami-mir-205a MIR-205 CCUUCAU MIMAT0038228 MIMAT0038229 NW_017713418.1 182498 182556 - Gnathostomata Vertebrata No
Bta-Mir-205-P4 bta-mir-205 MIR-205 CCUUCAU MIMAT0003545 None NC_037343.1 73900711 73900769 - Gnathostomata Vertebrata No 1
Cfa-Mir-205-P4 cfa-mir-205 MIR-205 CCUUCAU MIMAT0009845 None chr7 8090517 8090575 + Gnathostomata Vertebrata No 1
Cja-Mir-205-P4 None MIR-205 CCUUCAU None None CM021933.1 33100022 33100080 + Gnathostomata Vertebrata Unknown 1
Cli-Mir-205-P4 cli-mir-205a MIR-205 CCUUCAU MIMAT0038584 MIMAT0038585 scaffold454 2679550 2679609 + Gnathostomata Vertebrata No
Cmi-Mir-205-P4 None MIR-205 CCUUCAU None None KI635887.1 6369998 6370057 - Gnathostomata Vertebrata No
Cpi-Mir-205-P4 cpi-mir-205a MIR-205 CCUUCAU MIMAT0037830 MIMAT0037831 JH584752 3276917 3276975 - Gnathostomata Vertebrata No
Cpo-Mir-205-P4 cpo-mir-205 MIR-205 CCUUCAU MIMAT0047101 MIMAT0047102 scaffold_12 13745521 13745577 - Gnathostomata Vertebrata No 1
Dno-Mir-205-P4 dno-mir-205 MIR-205 CCUUCAU MIMAT0047746 MIMAT0047747 JH570311 3472382 3472440 + Gnathostomata Vertebrata Unknown 1
Eca-Mir-205-P4 eca-mir-205 MIR-205 CCUUCAU MIMAT0012962 None CM009152.1 26052128 26052186 - Gnathostomata Vertebrata Unknown 1
Ete-Mir-205-P4 None MIR-205 CCUUCAU None None JH980299 36621478 36621536 + Gnathostomata Vertebrata No 1
Gga-Mir-205-P4 gga-mir-205a MIR-205 CCUUCAU MIMAT0001184 None 26 3076446 3076504 + Gnathostomata Vertebrata No
Gja-Mir-205-P4 None MIR-205 CCUUCAU None None NW_015169831.1 86668 86725 - Gnathostomata Vertebrata Unknown
Hsa-Mir-205-P4 hsa-mir-205 MIR-205 CCUUCAU MIMAT0000266 MIMAT0009197 chr1 209432166 209432224 + Gnathostomata Vertebrata No 1
Laf-Mir-205-P4 None MIR-205 CCUUCAU None None GL010040.1 15715570 15715628 + Gnathostomata Vertebrata Unknown 1
Lch-Mir-205-P4 None MIR-205 CCUUCAU None None JH126576.1 4009299 4009357 - Gnathostomata Vertebrata Unknown
Loc-Mir-205-P4 None MIR-205 CCUUCAU None None LG3 30391194 30391253 - Gnathostomata Vertebrata No 1
Mdo-Mir-205-P4 mdo-mir-205a MIR-205 CCUUCAU MIMAT0012749 None 2 116544499 116544557 + Gnathostomata Vertebrata Unknown
Mml-Mir-205-P4 mml-mir-205 MIR-205 CCUUCAU MIMAT0006236 None CM014336.1 66925710 66925768 + Gnathostomata Vertebrata No 1
Mmr-Mir-205-P4 None MIR-205 CCUUCAU None None CM007687.1 33144787 33144845 + Gnathostomata Vertebrata No 1
Mmu-Mir-205-P4 mmu-mir-205 MIR-205 CCUUCAU MIMAT0000238 MIMAT0017003 chr1 193507467 193507524 - Gnathostomata Vertebrata No 1
Mun-Mir-205-P4 None MIR-205 CCUUCAU None None LR594643.1 8746416 8746474 + Gnathostomata Vertebrata Unknown
Neu-Mir-205-P4 None MIR-205 CCUUCAU None None CM051814.1 429406936 429406994 - Gnathostomata Vertebrata Unknown
Oan-Mir-205-P4 oan-mir-205 MIR-205 CCUUCAU MIMAT0006866 MIMAT0006867 NC_041734.1 65176531 65176589 + Gnathostomata Vertebrata Unknown
Ocu-Mir-205-P4 ocu-mir-205 MIR-205 CCUUCAU MIMAT0048325 MIMAT0048326 chr16 63274211 63274269 - Gnathostomata Vertebrata No 1
Pab-Mir-205-P4 None MIR-205 CCUUCAU None None CM054679.2 40077740 40077798 - Gnathostomata Vertebrata No 1
Pbv-Mir-205-P4 pbv-mir-205a MIR-205 CCUUCAU MIMAT0039009 None KE958769.1 21176 21234 - Gnathostomata Vertebrata Unknown
Rno-Mir-205-P4 rno-mir-205 MIR-205 CCUUCAU MIMAT0000878 None chr13 112233301 112233358 - Gnathostomata Vertebrata No 1
Sha-Mir-205-P4 sha-mir-205 MIR-205 CCUUCAU MIMAT0022812 None GL856783.1 365829 365887 + Gnathostomata Vertebrata No
Spt-Mir-205-P4 None MIR-205 CCUUCAU None None QEPC01002275.1 437140 437198 + Gnathostomata Vertebrata Unknown
Sto-Mir-205-P4 None MIR-205 CCUUCAU None None BFAA01000299.1 865493 865551 + Gnathostomata Vertebrata Unknown
Tgu-Mir-205-P4 None MIR-205 CCUUCAU None None 26 773136 773193 - Gnathostomata Vertebrata No
Xtr-Mir-205-P4 xtr-mir-205a MIR-205 CCUUCAU MIMAT0003697 None chr2 46983792 46983850 - Gnathostomata Vertebrata Unknown
Dre-Mir-205-P4a dre-mir-205 MIR-205 CCUUCAU MIMAT0001280 MIMAT0031925 chr23 33290291 33290350 + Clupeocephala Vertebrata No 1
Gmo-Mir-205-P4a gmo-mir-205-1 MIR-205 CCUUCAU MIMAT0044127 MIMAT0044128 GeneScaffold_1600 405491 405549 - Clupeocephala Vertebrata No 1
Mal-Mir-205-P4a None MIR-205 CCUUCAU None None KV884882.1 485056 485115 + Clupeocephala Vertebrata Unknown 1
Tni-Mir-205-P4a tni-mir-205 MIR-205 CCUUCAU MIMAT0002966 None 9 9353934 9353993 - Clupeocephala Vertebrata No 1
Gmo-Mir-205-P4b gmo-mir-205-2 MIR-205 CCUUCAU MIMAT0044127 MIMAT0044136 GeneScaffold_168 849071 849128 - Clupeocephala Vertebrata No 1
Mal-Mir-205-P4b None MIR-205 CCUUCAU None None KV884689.1 5320002 5320061 + Clupeocephala Vertebrata Unknown 1 1
Xla-Mir-205-P4c None MIR-205 CCUUCAU None None NC_030726.1 50756129 50756187 - X. laevis Vertebrata No
Xla-Mir-205-P4d xla-mir-205 MIR-205 CCUUCAU MIMAT0011142 None NC_030727.1 39955338 39955396 - X. laevis Vertebrata No
Ebu-Mir-205-P5 None MIR-205 CCUUCAU None None FYBX02009763.1 3258576 3258632 + E. burgeri Vertebrata Unknown 1
Ebu-Mir-205-P6 None MIR-205 CCUUCAU None None FYBX02009826.1 1134510 1134566 + E. burgeri Vertebrata No

(red - mature/co-mature, blue - star)

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