MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-205-P4

Family name MIR-205 (all species)
Seed CCUUCAU
Species Cow (Bos taurus)
MiRBase ID bta-mir-205
Paralogues
Orthologues Aca-Mir-205-P4  Ami-Mir-205-P4  Cfa-Mir-205-P4  Cli-Mir-205-P4  Cmi-Mir-205-P4  Cpi-Mir-205-P4  Cpo-Mir-205-P4  Dno-Mir-205-P4  Dre-Mir-205-P4a  Ete-Mir-205-P4  Gga-Mir-205-P4  Gja-Mir-205-P4  Gmo-Mir-205-P4a  Gmo-Mir-205-P4b  Hsa-Mir-205-P4  Lch-Mir-205-P4  Loc-Mir-205-P4  Loc-Mir-205-P4-as  Mal-Mir-205-P4a  Mal-Mir-205-P4b  Mdo-Mir-205-P4  Mml-Mir-205-P4  Mmu-Mir-205-P4  Mun-Mir-205-P4  Oan-Mir-205-P4  Ocu-Mir-205-P4  Pbv-Mir-205-P4  Rno-Mir-205-P4  Sha-Mir-205-P4  Spt-Mir-205-P4  Sto-Mir-205-P4  Tgu-Mir-205-P4  Tni-Mir-205-P4a  Xla-Mir-205-P4c  Xla-Mir-205-P4d  Xtr-Mir-205-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037343.1: 73900711-73900769 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGACCUCAGAUAGUCCAUGUGCUUCUCUUGUCCUUCAUUCCACCGGAGUCUGUCUCGUACCCAACCAGAUUUCAGUGGAGUGAAGUUCAGGAGGCGUGGAACUGACACCGGAGCUGCCG
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Structure
        10        20          30        40        50         
AGACCUCAGAUAGUCCAUGU--| U       UC           C        UCUCGU 
                      GC UCUCUUG  CUUCAUUCCAC GGAGUCUG      \
                      UG GGAGGAC  GAAGUGAGGUG CUUUAGAC      A
GCCGUCGAGGCCACAGUCAAGG^ C       UU           A        CAACCC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-205-P4_5p

mirBase accessionMIMAT0003545
Sequence
0- UCCUUCAUUCCACCGGAGUCUGU -23
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Proposed targets TargetScanVert: bta-miR-205
Star sequence

Bta-Mir-205-P4_3p*

mirBase accessionNone
Sequence
37- GAUUUCAGUGGAGUGAAGUUCA -59
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